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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:21.9TPM
GTEx:15.2RPKM
FANTOM5:46.8Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA011088

 

Antibody HPA012123

 

Antibody CAB037128

 

Antibody CAB037288

 

Glandular cells

Medium   Medium   High   High  
       
       
       

SMALL INTESTINE - HPA RNA-seq

Average TPM

21.9

overview Male, age 65
Sample 1
TPM: 21.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 23.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 22.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 20.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

15.2

GTEx sample id

RPKM

12.114.718.07.824.4024681012141618202224
 
12.114.718.07.824.4024681012141618202224

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 15.2
Samples: 88

Max RPKM: 24.4
Min RPKM: 7.8
Std RPKM: 4
Median RPKM: 14.7
GTEX-117YX-0326-SM-5GICL 24.4
GTEX-WH7G-1626-SM-4LVMY 23.0
GTEX-WRHK-1026-SM-4MVOD 23.0
GTEX-111CU-1326-SM-5NQ8L 22.8
GTEX-ZF2S-1726-SM-57WFT 22.8
GTEX-11VI4-1626-SM-5EQKO 22.4
GTEX-13O61-1326-SM-5KM31 21.8
GTEX-11XUK-1426-SM-5EQMG 21.6
GTEX-ZC5H-2326-SM-4WAYT 21.5
GTEX-1399U-2126-SM-5IFEZ 21.2
GTEX-WEY5-1526-SM-4LMJF 21.2
GTEX-145ME-0926-SM-5O9AR 20.1
GTEX-131XG-1726-SM-5LZUR 19.8
GTEX-ZQUD-0926-SM-57WE3 19.8
GTEX-WFJO-0926-SM-4LVM2 19.3
GTEX-Z9EW-0926-SM-5CVMM 19.1
GTEX-13OVI-1926-SM-5IJCG 18.8
GTEX-ZLFU-1526-SM-4WWBT 18.8
GTEX-14E6E-1626-SM-5RQI7 18.5
GTEX-XMK1-1826-SM-4B66F 18.4
GTEX-ZVP2-1726-SM-5GU5P 18.1
GTEX-13FH7-1226-SM-5IJFK 18.1
GTEX-ZP4G-1626-SM-57WGD 18.0
GTEX-WFG7-1726-SM-4LVME 17.9
GTEX-11P7K-1626-SM-5GU63 17.8
GTEX-13111-1426-SM-5DUW3 17.8
GTEX-VUSG-1726-SM-4KKZL 17.7
GTEX-UPK5-2026-SM-4JBIM 17.6
GTEX-ZVT2-2126-SM-5NQ93 17.6
GTEX-12WSK-1526-SM-5CVNO 17.5
GTEX-13O21-1026-SM-5IJDU 17.3
GTEX-13QBU-1926-SM-5IJEW 17.0
GTEX-ZQG8-2526-SM-57WEQ 17.0
GTEX-1399S-2026-SM-5KM4B 16.7
GTEX-XAJ8-0526-SM-47JYK 16.5
GTEX-X15G-1426-SM-4PQZK 16.2
GTEX-Y114-1426-SM-4TT6W 16.2
GTEX-11P82-0826-SM-5P9GU 15.8
GTEX-12BJ1-1926-SM-5HL9Z 15.7
GTEX-11NSD-1726-SM-5N9C3 15.7
GTEX-11DXX-1626-SM-5H11H 15.6
GTEX-11I78-1126-SM-5A5K5 15.4
GTEX-148VJ-2226-SM-5NQ9M 15.2
GTEX-WFG8-1626-SM-4LVMB 14.8
GTEX-1192X-2526-SM-59868 14.6
GTEX-Y3IK-1726-SM-4YCCR 14.4
GTEX-ZZ64-0526-SM-5GZXM 14.3
GTEX-14DAR-1426-SM-5RQIR 14.1
GTEX-131XF-1326-SM-5GCMQ 13.8
GTEX-ZPIC-2326-SM-57WDW 13.6
GTEX-139T6-1026-SM-5IJGC 13.6
GTEX-11EQ9-1326-SM-5985X 13.4
GTEX-ZPCL-1726-SM-57WEO 13.0
GTEX-ZTPG-2626-SM-57WFX 12.9
GTEX-XBED-1426-SM-4AT4G 12.8
GTEX-ZTSS-0926-SM-59865 12.8
GTEX-ZLV1-1126-SM-4WWBW 12.6
GTEX-13RTK-0826-SM-5Q5C6 12.6
GTEX-ZEX8-1826-SM-57WBH 12.5
GTEX-Y5LM-1626-SM-4VDTB 12.5
GTEX-13113-1226-SM-5EGHT 12.4
GTEX-YB5E-1526-SM-5IFIE 12.4
GTEX-145LT-1026-SM-5LU9O 12.3
GTEX-ZVZP-1826-SM-5GZXB 12.3
GTEX-YEC4-1726-SM-4W21E 12.1
GTEX-XGQ4-1326-SM-4GIDU 12.1
GTEX-YF7O-1826-SM-5IFIU 12.0
GTEX-ZYWO-1526-SM-5SIAL 11.8
GTEX-13FTW-2026-SM-5IJE2 11.7
GTEX-ZTX8-0526-SM-59HLD 11.6
GTEX-XUZC-1426-SM-4BRV3 11.5
GTEX-13PL7-2626-SM-5IFH4 11.4
GTEX-13D11-0726-SM-5LZZB 11.4
GTEX-13CF3-1226-SM-5LZXN 11.1
GTEX-111YS-1426-SM-5GID8 10.8
GTEX-1122O-1326-SM-5H11F 10.7
GTEX-ZXES-1526-SM-5NQ95 10.6
GTEX-X5EB-1626-SM-4E3IV 10.3
GTEX-ZYFG-2026-SM-5E43Y 10.2
GTEX-ZA64-1226-SM-5HL7B 10.0
GTEX-1399R-2026-SM-5K7WN 9.8
GTEX-139YR-2226-SM-5IFFW 9.3
GTEX-11DXZ-1326-SM-5H11X 9.2
GTEX-133LE-1426-SM-5IFH1 9.1
GTEX-Y9LG-1626-SM-5IFHM 9.1
GTEX-WQUQ-2426-SM-4MVNW 9.1
GTEX-VJYA-0926-SM-4KL1N 8.8
GTEX-XXEK-1026-SM-4BRUW 7.8
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

46.8

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 46.8
FF:10024-101D6 15,40,85 years, mixed 46.8

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