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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:9.5TPM
GTEx:7.8RPKM
FANTOM5:24.1Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Medium
Fibroblasts:Low
 

Antibody staining

Antibody HPA023566

  

Chondrocytes

 Medium  

Fibroblasts

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
 

Antibody staining

Antibody HPA023566

  

Adipocytes

 Not detected  

Fibroblasts

 Not detected  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

9.5
N/A Female, age 80
Sample 1
TPM: 12.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 6.3
N/A Female, age 57
Sample 3
TPM: 5.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 10.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 12.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

7.8

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 7.7
Samples: 350

Max RPKM: 27
Min RPKM: 2.2
Std RPKM: 3.7
Median RPKM: 6.8
GTEX-139D8-0326-SM-5IJCJ 27.0
GTEX-WI4N-1126-SM-3LK7Q 27.0
GTEX-OXRO-0226-SM-3LK6F 23.7
GTEX-T5JC-0526-SM-32PM7 22.2
GTEX-ZE7O-0226-SM-5S2N1 21.2
GTEX-ZE9C-2826-SM-5S2MO 19.1
GTEX-YJ8A-0526-SM-5IFHT 18.8
GTEX-U8XE-0426-SM-3DB91 18.7
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 7.9
Samples: 227

Max RPKM: 22.2
Min RPKM: 2
Std RPKM: 3.7
Median RPKM: 7.3
GTEX-X8HC-2326-SM-4QAS4 22.2
GTEX-ZE7O-1526-SM-5J1NH 19.5
GTEX-ZYVF-1026-SM-5E44V 19.3
GTEX-13OVH-1126-SM-5K7YP 17.6
GTEX-1192X-1526-SM-5H11I 17.2
GTEX-13JUV-0626-SM-5J1MQ 15.7
GTEX-13NZ9-2026-SM-5KM1U 15.7
GTEX-1212Z-0526-SM-5FQSQ 15.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

24.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 24.1
FF:10010-101C1 65,65,76 years, mixed 24.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.