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TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:77.8TPM
GTEx:142.5RPKM
FANTOM5:141.0Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA053969

 

Antibody CAB002220

 

Squamous epithelial cells

Medium   High  
   
   
   

ESOPHAGUS - HPA RNA-seq

Average TPM

77.8

overview Female, age 70
Sample 1
TPM: 60.7
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 60.0
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 112.6
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

142.5

GTEx sample id

RPKM

120.0142.9170.445.4227.7020406080100120140160180200220240260
 
120.0142.9170.445.4227.7020406080100120140160180200220240260

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 142.5
Samples: 286

Max RPKM: 269.8
Min RPKM: 45.4
Std RPKM: 37.2
Median RPKM: 142.9
GTEX-OIZG-1026-SM-3LK5X 269.8
GTEX-13OVI-2626-SM-5KM4T 227.7
GTEX-148VJ-1026-SM-5LU98 226.1
GTEX-RN64-1026-SM-48FDX 224.4
GTEX-O5YV-1026-SM-3LK72 222.8
GTEX-14A6H-1326-SM-5NQBC 217.4
GTEX-ZF3C-1626-SM-4WWB4 212.5
GTEX-ZE9C-1126-SM-4WWBD 210.8
GTEX-11TUW-1326-SM-5EQKV 210.5
GTEX-OXRP-0926-SM-48TC1 210.1
GTEX-14BIN-2726-SM-5RQIE 206.6
GTEX-145LV-1326-SM-5S2QI 206.1
GTEX-QVUS-0626-SM-447CC 200.6
GTEX-12696-1326-SM-5FQTJ 200.5
GTEX-UPK5-1226-SM-4IHL8 200.0
GTEX-PLZ4-1626-SM-3P618 197.3
GTEX-ZPCL-1426-SM-57WEC 195.4
GTEX-ZC5H-1326-SM-5HL7E 192.7
GTEX-QEG4-0726-SM-4R1JL 192.4
GTEX-ZLV1-0526-SM-4WWD4 191.2
GTEX-UPIC-1026-SM-4IHLT 190.9
GTEX-ZVT2-1326-SM-5E45H 190.8
GTEX-X3Y1-1326-SM-4PQZB 188.1
GTEX-13NZB-1226-SM-5J2MW 187.6
GTEX-ZYVF-2226-SM-5GIDD 186.8
GTEX-13QBU-1026-SM-5LU3R 186.2
GTEX-T2IS-0826-SM-4DM6L 186.2
GTEX-11ONC-1526-SM-5GU6S 186.0
GTEX-11P7K-1326-SM-5BC5G 184.9
GTEX-ZG7Y-1126-SM-4WWEZ 184.8
GTEX-N7MT-0326-SM-48TDP 184.6
GTEX-11DXZ-1226-SM-5H11L 184.4
GTEX-XOTO-2126-SM-4B64U 184.4
GTEX-14ICL-0526-SM-5RQJ6 184.1
GTEX-R3RS-1326-SM-48FE7 184.1
GTEX-XQ8I-1526-SM-4BOOH 183.6
GTEX-P4PQ-0626-SM-3NMCU 183.5
GTEX-131YS-1426-SM-5IJF7 183.4
GTEX-T5JC-1726-SM-4DM6U 182.8
GTEX-ZUA1-1226-SM-5NQ6O 182.3
GTEX-ZXES-1126-SM-5GZXN 182.1
GTEX-U3ZM-0526-SM-4DXTB 181.5
GTEX-PWN1-0626-SM-48TDT 181.3
GTEX-WQUQ-1626-SM-4OOSH 181.2
GTEX-1122O-1726-SM-5GICM 181.1
GTEX-13FTX-0526-SM-5IFGS 180.9
GTEX-X62O-2226-SM-46MW3 179.6
GTEX-14AS3-0626-SM-5QGQD 178.5
GTEX-YB5E-0926-SM-4WWDQ 178.2
GTEX-144GM-1426-SM-5LU31 177.4
GTEX-11ZTS-2626-SM-5EGIC 177.1
GTEX-YJ89-1526-SM-5P9IR 176.8
GTEX-14H4A-1626-SM-5SI69 176.5
GTEX-13FLV-1126-SM-5J2NO 176.4
GTEX-14DAQ-1426-SM-5RQJD 175.5
GTEX-RVPV-0526-SM-47JYL 174.8
GTEX-NFK9-1126-SM-3LK78 174.7
GTEX-131XG-1026-SM-5GCMX 174.6
GTEX-ZTSS-0626-SM-59867 174.5
GTEX-OIZH-0626-SM-3NB1L 173.0
GTEX-OXRN-1726-SM-3NM9B 173.0
GTEX-RWS6-0826-SM-47JXF 173.0
GTEX-1399R-0826-SM-5IJEL 172.7
GTEX-S33H-0826-SM-4AD5Y 172.5
GTEX-PLZ6-0526-SM-3P61C 172.0
GTEX-QESD-0826-SM-47J4G 171.7
GTEX-S7SF-0926-SM-4AD4M 171.4
GTEX-U3ZH-1026-SM-4DXUZ 171.1
GTEX-YEC3-2526-SM-4YCDN 171.0
GTEX-117YX-1626-SM-5GZZG 170.9
GTEX-11NUK-1326-SM-5P9GN 170.6
GTEX-WVLH-1426-SM-4MVNX 170.6
GTEX-12WSK-1126-SM-5LZV8 169.9
GTEX-13QJ3-1726-SM-5RQK9 169.4
GTEX-ZF29-1326-SM-4WWB6 168.7
GTEX-11I78-1526-SM-5A5K7 168.6
GTEX-13OW8-2326-SM-5L3I9 168.6
GTEX-PWCY-0726-SM-48TCS 168.4
GTEX-V1D1-1026-SM-4JBHE 168.2
GTEX-X4EO-1226-SM-4QARR 168.2
GTEX-OIZI-1426-SM-3NB1T 167.5
GTEX-ZDYS-0826-SM-4WWCR 166.6
GTEX-11NSD-1126-SM-5N9BQ 166.4
GTEX-13O1R-1326-SM-5IJF5 166.1
GTEX-13X6K-2126-SM-5O9D4 165.7
GTEX-QV44-1126-SM-4R1KO 165.7
GTEX-11DXY-1426-SM-5N9CN 165.5
GTEX-12ZZX-1326-SM-5DUWI 165.4
GTEX-13O3Q-0826-SM-5IFGF 165.0
GTEX-11P81-0826-SM-5P9GR 164.6
GTEX-ZPU1-1426-SM-4WWFU 164.6
GTEX-1399Q-1126-SM-5P9JA 164.5
GTEX-S4Q7-0626-SM-4AD5M 164.4
GTEX-12ZZY-1426-SM-5N9EI 162.9
GTEX-1399S-1326-SM-5P9GH 162.7
GTEX-XK95-1026-SM-4GIDV 161.9
GTEX-Y9LG-0626-SM-4WWDH 161.7
GTEX-QCQG-0626-SM-48U21 161.2
GTEX-REY6-1326-SM-48FDO 161.1
GTEX-TML8-1526-SM-4DXUX 161.0
GTEX-13G51-0926-SM-5IFFU 160.7
GTEX-ZF2S-1226-SM-4WWAX 160.1
GTEX-YF7O-0926-SM-5IFIF 160.0
GTEX-W5WG-1626-SM-4LMKG 159.7
GTEX-XBEW-1326-SM-4AT63 159.6
GTEX-ZYT6-1126-SM-5GZYR 158.1
GTEX-11P82-0526-SM-5986P 157.5
GTEX-139UW-1126-SM-5IJEJ 157.4
GTEX-U3ZN-1726-SM-4DXUQ 156.8
GTEX-U4B1-0826-SM-4DXTW 156.0
GTEX-R55E-1326-SM-48FCR 154.7
GTEX-12C56-1226-SM-5FQSU 154.6
GTEX-11EMC-2226-SM-5A5JW 153.8
GTEX-11GSP-1826-SM-5N9DQ 153.8
GTEX-T8EM-0526-SM-4DM64 153.6
GTEX-RTLS-1126-SM-46MUQ 153.3
GTEX-TKQ1-0326-SM-4DXSM 153.2
GTEX-QEL4-1426-SM-447AC 153.1
GTEX-12WSA-1426-SM-5EGJU 152.8
GTEX-Y5V5-1626-SM-4VDSG 152.0
GTEX-VUSG-1226-SM-4KKZF 151.7
GTEX-ZTPG-1626-SM-5DUX2 151.6
GTEX-Z9EW-0526-SM-5HL8S 151.2
GTEX-12BJ1-1626-SM-5HL8Y 150.1
GTEX-QDVJ-0726-SM-48U1W 150.0
GTEX-ZAB4-1126-SM-5HL86 150.0
GTEX-12WSD-1826-SM-5GCOA 149.2
GTEX-WFON-0826-SM-4LVMI 149.0
GTEX-132QS-1426-SM-5P9GE 148.7
GTEX-X4XY-1726-SM-46MVO 147.8
GTEX-12KS4-0926-SM-5BC5S 147.7
GTEX-R55G-1026-SM-48FDI 147.1
GTEX-SE5C-1226-SM-4BRWV 146.3
GTEX-OOBK-0625-SM-3LK5P 145.9
GTEX-ZT9W-1326-SM-51MTB 145.7
GTEX-147F3-0826-SM-5NQA7 145.6
GTEX-XUZC-0426-SM-4BOPE 145.5
GTEX-ZGAY-1126-SM-4WWBS 145.0
GTEX-13W46-1926-SM-5J2MF 144.5
GTEX-S95S-0426-SM-4B64I 144.4
GTEX-X15G-0826-SM-4PQZD 144.0
GTEX-XQ3S-1126-SM-4BOPK 142.9
GTEX-ZQUD-0426-SM-57WFR 142.9
GTEX-13D11-1926-SM-5IFGB 142.8
GTEX-PVOW-1626-SM-48TC9 142.4
GTEX-WH7G-0926-SM-4LVMJ 142.1
GTEX-ZVP2-1326-SM-57WCE 142.0
GTEX-S341-0526-SM-4AD5U 141.8
GTEX-ZY6K-0626-SM-59HJL 141.4
GTEX-WFG7-1126-SM-4LMK3 141.2
GTEX-R53T-1126-SM-48FD4 140.9
GTEX-117YW-1926-SM-5H121 140.8
GTEX-ZZ64-0226-SM-5E44X 140.8
GTEX-14C38-2126-SM-5RQJO 140.3
GTEX-QEG5-1426-SM-447AS 140.2
GTEX-144FL-2726-SM-5O98Z 139.8
GTEX-139TU-1226-SM-5J2NL 138.5
GTEX-R55C-0826-SM-48FCL 138.3
GTEX-WRHK-0526-SM-4MVOF 136.8
GTEX-T6MO-0526-SM-4DM6R 136.3
GTEX-13RTK-0526-SM-5S2QF 135.9
GTEX-QLQ7-0926-SM-447BC 135.6
GTEX-11ZU8-1526-SM-5EGHX 135.2
GTEX-13FHO-1726-SM-5IFGM 135.2
GTEX-SUCS-0726-SM-4DM7J 135.2
GTEX-Y8E4-1726-SM-5LU9G 134.8
GTEX-ZYFG-1126-SM-5GICY 134.4
GTEX-11XUK-0826-SM-5GU6P 134.3
GTEX-ZVE2-1326-SM-5NQ94 134.3
GTEX-13PVR-1826-SM-5Q5CC 134.1
GTEX-VJYA-0726-SM-4KL1T 134.1
GTEX-139T6-0626-SM-5IFF9 133.8
GTEX-WOFM-0626-SM-4OOS3 133.6
GTEX-13FH7-0526-SM-5IJF8 133.4
GTEX-145MO-1426-SM-5Q5BS 133.2
GTEX-11EQ9-0726-SM-5A5K2 132.5
GTEX-ZYWO-1026-SM-5E45U 132.3
GTEX-WK11-1026-SM-4OOS8 132.2
GTEX-WFG8-1226-SM-4V6EI 131.8
GTEX-X585-1226-SM-46MW7 130.0
GTEX-ZA64-0626-SM-5HL9O 130.0
GTEX-RNOR-1226-SM-48FDQ 129.9
GTEX-131XF-0826-SM-5GICG 129.6
GTEX-UJHI-0826-SM-4IHLM 129.3
GTEX-144GN-0626-SM-5O9B2 128.9
GTEX-Q2AI-0626-SM-48TZU 128.8
GTEX-13OVG-0626-SM-5IFEP 128.6
GTEX-QDVN-1026-SM-48TZA 128.6
GTEX-OXRK-1326-SM-3NB1A 128.3
GTEX-13S86-0826-SM-5SI6J 128.2
GTEX-Y8LW-0726-SM-5IFI1 128.0
GTEX-13U4I-1126-SM-5LU3S 127.8
GTEX-XXEK-0326-SM-4BRVV 127.8
GTEX-13111-0826-SM-5LZV3 127.4
GTEX-P4PP-0626-SM-3NM9X 127.1
GTEX-XBED-1026-SM-48TCB 126.7
GTEX-Y114-0926-SM-4TT7J 126.6
GTEX-P4QT-0626-SM-3NMCP 126.0
GTEX-14E1K-1226-SM-5S2PD 125.9
GTEX-145LT-1126-SM-5LUA1 125.5
GTEX-111YS-0926-SM-5EGGI 125.4
GTEX-Y5LM-1026-SM-4VDSQ 125.3
GTEX-RU72-0726-SM-46MUW 124.6
GTEX-S4P3-0426-SM-4AD56 124.4
GTEX-13FTW-1626-SM-5KM4N 123.9
GTEX-YFC4-1226-SM-5LU9R 123.7
GTEX-132AR-2226-SM-5J2NT 122.8
GTEX-13W3W-1626-SM-5LU35 122.1
GTEX-132Q8-1826-SM-5EGIY 121.8
GTEX-S32W-0926-SM-4AD5X 121.5
GTEX-139YR-1726-SM-5IFFK 121.2
GTEX-Y3IK-1126-SM-51MSV 121.1
GTEX-146FH-1726-SM-5QGQ2 120.6
GTEX-ZYY3-1526-SM-5SIA9 120.6
GTEX-QLQW-0526-SM-4R1KS 119.8
GTEX-1497J-2726-SM-5SI9W 119.3
GTEX-PLZ5-0926-SM-3TW8L 118.1
GTEX-WFJO-0826-SM-4LVM5 118.0
GTEX-Y5V6-1026-SM-4VBS2 117.3
GTEX-11LCK-1726-SM-5S2OQ 116.0
GTEX-14E6E-0726-SM-5S2R3 115.8
GTEX-1211K-0926-SM-5FQTL 115.2
GTEX-XUJ4-1026-SM-4BOPB 113.2
GTEX-U8XE-1726-SM-4E3IF 113.0
GTEX-RU1J-0326-SM-46MUM 111.9
GTEX-145MN-1026-SM-5NQ9G 111.8
GTEX-XYKS-1526-SM-4BRUP 111.6
GTEX-ZYW4-1326-SM-5E45N 110.4
GTEX-RM2N-0726-SM-48FD5 109.8
GTEX-SNMC-0526-SM-4DM69 109.8
GTEX-SNOS-0626-SM-4DM5F 109.0
GTEX-Q2AH-0826-SM-48TZN 107.3
GTEX-1212Z-2126-SM-5FQTM 106.5
GTEX-13CF3-1626-SM-5IFG9 106.1
GTEX-Y3I4-1226-SM-4TT8N 105.6
GTEX-TSE9-1226-SM-4DXTM 104.5
GTEX-NPJ8-1926-SM-3MJGB 102.5
GTEX-P78B-1026-SM-3NMC4 101.8
GTEX-WEY5-0926-SM-4LMI4 101.4
GTEX-11DXX-1126-SM-5GZZK 100.5
GTEX-111CU-0726-SM-5GZYD 100.3
GTEX-12WSL-1526-SM-5GCP8 99.9
GTEX-PSDG-1326-SM-48TD2 99.7
GTEX-11VI4-0526-SM-5EQ48 99.1
GTEX-X4LF-0626-SM-4QASB 98.5
GTEX-131XE-1426-SM-5HL7V 98.4
GTEX-V955-1126-SM-4JBH3 98.4
GTEX-13OVJ-1226-SM-5L3HA 96.9
GTEX-UJMC-0926-SM-4IHLK 96.6
GTEX-YECK-1626-SM-5IFHQ 96.5
GTEX-XGQ4-1526-SM-4AT6H 96.3
GTEX-1399U-1026-SM-5J1OC 95.1
GTEX-OXRL-0626-SM-3NM9C 94.3
GTEX-13O21-0626-SM-5IJDI 93.7
GTEX-14BMU-0926-SM-5S2QB 93.1
GTEX-13PVQ-1726-SM-5IFF3 92.3
GTEX-146FR-0426-SM-5SI97 91.8
GTEX-XMD2-1326-SM-4YCET 91.4
GTEX-Y111-1626-SM-57WCY 90.4
GTEX-ZTX8-0226-SM-5E44D 90.4
GTEX-11EM3-0826-SM-5N9CC 90.1
GTEX-145LS-1826-SM-5LUAZ 89.0
GTEX-XV7Q-1126-SM-4BRVS 88.8
GTEX-13X6H-1326-SM-5LU42 88.3
GTEX-11DYG-1326-SM-5N9DO 87.7
GTEX-R55D-1126-SM-48FEB 87.7
GTEX-133LE-0626-SM-5IFFJ 86.5
GTEX-145ME-0526-SM-5QGQV 86.0
GTEX-11TT1-0526-SM-5P9JO 84.9
GTEX-ZT9X-0526-SM-5GCOP 84.3
GTEX-ZZPT-1426-SM-5N9C5 83.1
GTEX-S3XE-0926-SM-4AD4S 82.2
GTEX-XMK1-1326-SM-4B65Q 79.9
GTEX-R45C-1226-SM-48FEE 76.1
GTEX-145MF-1426-SM-5O9B6 74.5
GTEX-TMMY-1126-SM-4DXSX 72.5
GTEX-P4QS-0626-SM-3NMD1 71.5
GTEX-146FQ-1026-SM-5LU8I 68.8
GTEX-ZAB5-0926-SM-5CVMV 67.6
GTEX-T5JW-1326-SM-4DM5G 65.7
GTEX-12ZZW-1726-SM-5DUVD 65.2
GTEX-11DZ1-2026-SM-5A5KG 59.8
GTEX-XLM4-2326-SM-4TT2D 59.6
GTEX-13X6I-1026-SM-5LU4C 53.9
GTEX-RUSQ-0826-SM-47JWW 48.4
GTEX-144GO-2726-SM-5O9A2 45.4
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

141.0

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 141.0
FF:10015-101C6 68,74,75 years, mixed 141.0

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