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CTNNB1
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    CELL

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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:28.7RPKM
FANTOM5:227.4Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Low
 

Antibody staining

Antibody HPA029159

 

Antibody HPA029160

 

Antibody CAB000108

 

Antibody CAB001950

 

Glial cells

Low   Not detected   Not detected   Low  

Neuronal cells

Medium   Low   Not detected   Not detected  
       
       
       

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

28.7

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 28.7
Samples: 117

Max RPKM: 50.5
Min RPKM: 14.9
Std RPKM: 6.7
Median RPKM: 28
GTEX-NPJ8-0011-R5a-SM-2HMJY 50.5
GTEX-13JUV-0011-R5a-SM-5LZY5 46.7
GTEX-WHSE-0011-R5A-SM-3P5ZO 45.8
GTEX-N7MT-0011-R5a-SM-2I3G6 41.9
GTEX-OHPN-0011-R5A-SM-2I5FF 41.5
GTEX-P44H-0011-R5A-SM-2XCEX 40.6
GTEX-T2IS-0011-R5A-SM-32QP4 40.6
GTEX-XMD1-0011-R5A-SM-4AT47 40.5
GTEX-NL4W-0011-R5a-SM-2I3GD 39.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 39.9
GTEX-QVJO-0011-R5A-SM-2S1QM 39.3
GTEX-N7MS-0011-R5a-SM-2HMK8 39.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 38.5
GTEX-13OW6-0011-R5a-SM-5O9BK 37.8
GTEX-R55E-0011-R5A-SM-2TC5N 37.1
GTEX-QMR6-0011-R5A-SM-32PKT 36.5
GTEX-11H98-0011-R5b-SM-57WCF 36.3
GTEX-S7SE-0011-R5A-SM-2XCDA 36.0
GTEX-13X6I-0011-R5a-SM-5PNWW 35.3
GTEX-13JVG-0011-R5a-SM-5MR4O 35.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 35.2
GTEX-X4XX-0011-R5A-SM-46MWN 34.9
GTEX-PVOW-0011-R5A-SM-32PL7 34.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 34.5
GTEX-131YS-0011-R5b-SM-5K7YB 33.8
GTEX-12WSA-0011-R5b-SM-5GU5I 33.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 33.3
GTEX-WWYW-0011-R5A-SM-3NB3E 32.9
GTEX-13G51-0011-R5a-SM-5L3EB 32.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 32.0
GTEX-WVLH-0011-R5A-SM-3MJFW 31.6
GTEX-144GO-0011-R5a-SM-5PNUR 31.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 31.2
GTEX-T6MN-0011-R5A-SM-32QPD 31.2
GTEX-12WSB-0011-R5b-SM-5GU67 30.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 30.7
GTEX-X585-0011-R5A-SM-46MVI 30.4
GTEX-11OF3-0011-R5a-SM-57WB4 30.3
GTEX-1399T-0011-R5b-SM-5IJDK 30.1
GTEX-NL3H-0011-R5a-SM-2I3GB 30.0
GTEX-WZTO-0011-R5B-SM-3NMC5 30.0
GTEX-132Q8-0011-R5a-SM-5IJDM 29.9
GTEX-13S7M-0011-R5b-SM-5P9HS 29.9
GTEX-RU72-0011-R5A-SM-2TF6U 29.7
GTEX-139TS-0011-R5b-SM-5J2MZ 29.6
GTEX-ZE7O-0011-R5a-SM-57WBO 29.4
GTEX-RVPV-0011-R5A-SM-2TF69 29.3
GTEX-13X6K-0011-R5b-SM-5PNUE 29.2
GTEX-11GSP-0011-R5a-SM-57WBE 29.1
GTEX-14ABY-0011-R5b-SM-5SI7B 29.1
GTEX-UTHO-0011-R5A-SM-3GIJD 29.1
GTEX-1445S-0011-R5a-SM-5PNUS 28.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 28.7
GTEX-13OVL-0011-R5b-SM-5L3FU 28.6
GTEX-145LS-0011-R5a-SM-5SI65 28.5
GTEX-NPJ7-0011-R5a-SM-33HBK 28.4
GTEX-X261-0011-R5A-SM-3NMB4 28.4
GTEX-T5JC-0011-R5A-SM-32PLK 28.3
GTEX-13NYS-0011-R5a-SM-5MR4D 28.0
GTEX-WL46-0011-R5A-SM-3LK6V 27.8
GTEX-12WSD-0011-R5b-SM-5CVNG 27.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 27.6
GTEX-145MH-0011-R5a-SM-5P9JT 27.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 27.5
GTEX-12WSC-0011-R5b-SM-5CVNS 27.2
GTEX-ZUA1-0011-R5b-SM-51MTG 27.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 27.1
GTEX-139TT-0011-R5b-SM-5K7W8 27.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 26.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 26.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 26.9
GTEX-1313W-0011-R5b-SM-5L3EP 26.7
GTEX-RVPU-0011-R5A-SM-2XCAD 26.6
GTEX-13FLW-0011-R5a-SM-5LZX6 26.2
GTEX-13FLV-0011-R5a-SM-5LZWT 26.1
GTEX-12WSF-0011-R5a-SM-5HL8K 26.0
GTEX-11WQC-0011-R5a-SM-5BC74 25.9
GTEX-13OW5-0011-R5b-SM-5L3FR 25.9
GTEX-14BIM-0011-R5b-SM-5S2RM 25.9
GTEX-144GL-0011-R5b-SM-5PNUJ 25.8
GTEX-13NYB-0011-R5a-SM-5MR45 25.7
GTEX-13X6J-0011-R5b-SM-5PNWT 25.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 25.6
GTEX-13VXU-0011-R5a-SM-5O9D7 25.4
GTEX-YFC4-0011-R5a-SM-4RGLR 25.4
GTEX-13FXS-0011-R5b-SM-5LZYE 25.1
GTEX-13OW7-0011-R5b-SM-5O9DM 24.4
GTEX-OXRN-0011-R5A-SM-2I5EF 24.2
GTEX-13O3O-0011-R5b-SM-5KM44 23.9
GTEX-ZXG5-0011-R5b-SM-57WBN 23.9
GTEX-14BIN-0011-R5b-SM-5SI78 23.8
GTEX-13CZV-0011-R5a-SM-5K7XA 23.7
GTEX-S7PM-0011-R5A-SM-3NM8G 23.7
GTEX-13112-0011-R5b-SM-5DUV8 23.5
GTEX-13SLX-0011-R5a-SM-5O9BV 23.5
GTEX-11NV4-0011-R5a-SM-5NQ88 23.4
GTEX-11UD1-0011-R5b-SM-5P9FP 22.5
GTEX-Z93S-0011-R5b-SM-4RGNI 22.4
GTEX-12ZZX-0011-R5a-SM-5HL89 22.3
GTEX-13OVH-0011-R5b-SM-5KM4L 21.9
GTEX-ZVT3-0011-R5a-SM-51MSI 21.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 21.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 21.5
GTEX-1477Z-0011-R5b-SM-5PNUO 20.9
GTEX-13CF2-0011-R5a-SM-5LZWS 20.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 20.1
GTEX-TSE9-0011-R5A-SM-3DB7J 19.9
GTEX-XOTO-0011-R5A-SM-4B657 19.8
GTEX-13FHP-0011-R5b-SM-5LZY2 19.6
GTEX-13NZA-0011-R5b-SM-5KM4K 19.5
GTEX-YJ89-0011-R5a-SM-4V6GM 18.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 18.4
GTEX-13CIG-0011-R5b-SM-5L3F2 17.5
GTEX-ZV68-0011-R5a-SM-4YCDW 16.6
GTEX-139T8-0011-R5b-SM-5J1MO 16.3
GTEX-12WSH-0011-R5b-SM-5P9F3 15.4
GTEX-145MG-0011-R5b-SM-5S2VU 14.9
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

227.4

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 227.4
FF:10164-103B2 76 years, female 230.9
FF:10379-105H1 89 years, female 223.8

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