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TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:111.5TPM
GTEx:32.1RPKM
FANTOM5:245.3Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Low
Cells in tubules:High
 

Antibody staining

Antibody HPA029159

 

Antibody HPA029160

 

Antibody CAB000108

 

Antibody CAB001950

 

Cells in glomeruli

Medium   Low   Medium   Not detected  

Cells in tubules

High   High   Medium   Low  
       
       
       

KIDNEY - HPA RNA-seq

Average TPM

111.5

overview Female, age 58
Sample 1
TPM: 111.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 92.1
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 114.1
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 86.3
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 89.5
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 132.5
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 75.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 153.5
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 148.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

32.1

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 32.1
Samples: 32

Max RPKM: 47.1
Min RPKM: 16
Std RPKM: 9.5
Median RPKM: 31.8
GTEX-13OVI-1126-SM-5KLZF 47.1
GTEX-QLQW-1626-SM-4R1K1 45.9
GTEX-145MN-0326-SM-5QGQI 45.2
GTEX-ZYFG-1626-SM-5GZYY 43.9
GTEX-1399S-0526-SM-5IJG8 43.5
GTEX-ZLFU-0926-SM-5P9F8 43.0
GTEX-ZVZP-0926-SM-5GIDB 42.1
GTEX-RN64-1626-SM-48FD7 41.7
GTEX-147F4-2626-SM-5Q5CS 41.0
GTEX-XPVG-0526-SM-4B65N 39.5
GTEX-11TTK-1926-SM-5PNW8 38.0
GTEX-1497J-0826-SM-5NQAJ 36.9
GTEX-ZYT6-2226-SM-5GIC9 36.4
GTEX-12696-0926-SM-5FQTV 34.1
GTEX-12WSG-0826-SM-5EQ5A 33.4
GTEX-UPIC-1126-SM-4IHLO 32.6
GTEX-11GS4-2326-SM-5A5KS 31.0
GTEX-13112-2126-SM-5GCO4 30.9
GTEX-P4QS-1126-SM-3NMD5 30.8
GTEX-13RTJ-2226-SM-5S2Q1 28.6
GTEX-QDVN-1626-SM-48TZC 28.4
GTEX-13O1R-2526-SM-5N9FW 27.8
GTEX-Y5V6-2026-SM-5IFHO 26.3
GTEX-13OVL-1826-SM-5KLZR 25.3
GTEX-ZC5H-1726-SM-5HL7X 23.8
GTEX-13NYB-1726-SM-5N9G2 21.7
GTEX-T5JC-1526-SM-4DM68 21.3
GTEX-13OW6-1826-SM-5N9F9 19.9
GTEX-ZYFD-1526-SM-5NQ7T 17.9
GTEX-N7MS-1626-SM-3LK5F 17.2
GTEX-11OF3-1326-SM-5N9FJ 16.2
GTEX-NPJ8-2226-SM-3TW8D 16.0
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

245.3

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 245.3
FF:10017-101C8 60,62,63 years, female 245.3

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