Tissue expression of TTC39C - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	16.5	TPM
GTEx:	3.3	RPKM
FANTOM5:	20.3	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Chondrocytes:	Medium

Antibody staining	Antibody HPA065713
Adipocytes	Not detected
Chondrocytes	Medium

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Low

Antibody staining	Antibody HPA065713
Adipocytes	Not detected
Fibroblasts	Not detected
Peripheral nerve	Low

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	16.5

Female, age 80

Sample 1
TPM: 22.2

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 12.8

Female, age 57

Sample 3
TPM: 13.1

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 15.2

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 19.1

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	3.3

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 3.1

Samples: 350

Max RPKM: 6.2
Min RPKM: 1.3
Std RPKM: 0.7
Median RPKM: 3

GTEX-WEY5-1926-SM-3GIL8

6.2

GTEX-QCQG-1826-SM-2S1P2

5.6

GTEX-QDT8-0226-SM-32PL4

5.4

GTEX-SNMC-1326-SM-2XCFK

5.4

GTEX-11EM3-2326-SM-5H12B

5.3

GTEX-WY7C-2426-SM-3NB2V

5.3

GTEX-13YAN-0426-SM-5O9DR

4.9

GTEX-P4PP-0226-SM-5S2VR

4.9

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Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 3.7

Samples: 227

Max RPKM: 10.5
Min RPKM: 0.8
Std RPKM: 1
Median RPKM: 3.6

GTEX-13S7M-0826-SM-5QGQX

10.5

GTEX-145MI-0826-SM-5SI95

7.4

GTEX-145ME-0726-SM-5O9A3

7.3

GTEX-13X6I-1526-SM-5SIAC

6.6

GTEX-13O3P-0926-SM-5IFFI

6.5

GTEX-W5X1-1426-SM-3GIKH

5.7

GTEX-12ZZW-2326-SM-5DUW2

5.6

GTEX-ZP4G-1326-SM-5EGIW

5.5

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	20.3

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 20.3

FF:10010-101C1

65,65,76 years, mixed

20.3