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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:72.2TPM
GTEx:56.1RPKM
FANTOM5:138.8Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA001671

 

Antibody HPA058603

 

Antibody CAB003859

 

Antibody CAB068241

 

Antibody CAB068242

 

Adipocytes

High   Medium   Not detected   High   Medium  

Glandular cells

High   Medium   Low   High   Medium  

Myoepithelial cells

Medium   Low   Low   Not detected   Medium  
         
         

BREAST - HPA RNA-seq

Average TPM

72.2

overview Female, age 52
Sample 1
TPM: 78.1
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 57.4
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 77.4
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 76.2
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

56.1

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 56.1
Samples: 214

Max RPKM: 123.3
Min RPKM: 20.3
Std RPKM: 16.7
Median RPKM: 52.9
GTEX-11WQK-2426-SM-5GU5C 123.3
GTEX-QEG5-0726-SM-4R1JQ 105.4
GTEX-ZAJG-0626-SM-5HL8X 104.2
GTEX-WI4N-1426-SM-3LK7H 99.1
GTEX-U8XE-0826-SM-4E3J1 96.8
GTEX-X4EP-2926-SM-3P5YQ 96.6
GTEX-13PVQ-1026-SM-5KM3M 96.4
GTEX-X261-0626-SM-3NMD9 95.2
GTEX-13O3O-0826-SM-5K7WE 93.6
GTEX-144GM-0926-SM-5O994 93.5
GTEX-1211K-1926-SM-5EQLB 93.0
GTEX-13O3P-0826-SM-5L3DH 92.6
GTEX-U412-1826-SM-4DXTJ 92.6
GTEX-13N1W-0626-SM-5MR4U 90.3
GTEX-13CF3-2126-SM-5IFJP 89.3
GTEX-X4XY-0926-SM-4E3JD 89.3
GTEX-11TUW-1826-SM-5BC5D 87.8
GTEX-REY6-2426-SM-48FF5 86.1
GTEX-13NZ9-1026-SM-5MR5K 82.9
GTEX-RUSQ-2026-SM-4GIAK 80.8
GTEX-T2IS-1526-SM-32QPR 78.9
GTEX-11DZ1-0326-SM-5N9BN 77.7
GTEX-ZV7C-1826-SM-5NQ83 76.6
GTEX-14E6E-1326-SM-5S2NR 76.2
GTEX-13OW5-2226-SM-5L3HC 75.0
GTEX-ZYW4-0826-SM-5GIDG 74.4
GTEX-ZY6K-1626-SM-5GZWV 74.2
GTEX-XV7Q-2326-SM-4BRVZ 74.1
GTEX-R3RS-0626-SM-48FE1 73.9
GTEX-R55F-1726-SM-2TF4R 73.6
GTEX-13W46-0826-SM-5LU3H 72.8
GTEX-145ME-1526-SM-5Q5F2 72.6
GTEX-1313W-0826-SM-5EQ4T 71.7
GTEX-ZLFU-2126-SM-4WWEV 71.5
GTEX-13O3Q-2226-SM-5KM4O 71.2
GTEX-WOFL-0826-SM-3MJG1 71.2
GTEX-13NZ8-0126-SM-5IJCT 70.8
GTEX-11EM3-1326-SM-5N9C6 68.8
GTEX-Y8LW-1626-SM-5IFHX 68.5
GTEX-VJWN-0726-SM-3GIJ8 68.1
GTEX-ZTX8-1226-SM-4YCE9 67.6
GTEX-ZU9S-1926-SM-5NQBP 67.5
GTEX-ZTTD-1026-SM-51MRD 67.3
GTEX-XBED-1626-SM-47JYN 66.7
GTEX-TKQ2-1826-SM-33HB2 66.6
GTEX-13OW8-0226-SM-5K7UP 65.8
GTEX-Y5V6-2126-SM-4WWFX 64.8
GTEX-S4Q7-1126-SM-4AD6R 64.5
GTEX-ZC5H-2626-SM-5J2MG 64.3
GTEX-146FH-0826-SM-5SI8T 64.1
GTEX-ZF3C-2326-SM-5S2MZ 64.0
GTEX-WYBS-0926-SM-3NM94 63.6
GTEX-13FHO-0826-SM-5L3E8 63.4
GTEX-ZA64-1526-SM-5CVMD 63.4
GTEX-11EMC-2026-SM-5A5JV 62.9
GTEX-12WSN-1326-SM-5GCNT 62.9
GTEX-13S86-1226-SM-5S2OA 62.9
GTEX-XOT4-0726-SM-4GIAW 62.8
GTEX-S4P3-1326-SM-4AD6V 62.7
GTEX-ZF29-1926-SM-5S2P1 62.6
GTEX-Y9LG-1426-SM-5IFJZ 62.0
GTEX-QEL4-2126-SM-447AE 61.4
GTEX-1269C-2426-SM-5FQSN 61.1
GTEX-13W3W-1226-SM-5LU4H 61.0
GTEX-SIU7-1626-SM-4BRUK 61.0
GTEX-ZYWO-2326-SM-5GZY4 61.0
GTEX-11LCK-2426-SM-5HL5F 60.9
GTEX-T6MO-0326-SM-32QOK 60.9
GTEX-145MO-0826-SM-5NQBL 60.6
GTEX-11TT1-2126-SM-5GU5Y 60.3
GTEX-TKQ1-0226-SM-33HB5 60.2
GTEX-14753-2426-SM-5LU8U 60.1
GTEX-13QIC-2326-SM-5LU5N 60.0
GTEX-1117F-2826-SM-5GZXL 59.8
GTEX-111YS-1926-SM-5GICC 59.8
GTEX-1314G-1226-SM-5BC6D 59.7
GTEX-RU72-0626-SM-46MUI 59.5
GTEX-12WSM-1726-SM-5BC6J 58.1
GTEX-13O61-1826-SM-5KM4I 58.1
GTEX-XMD2-0926-SM-4WWEF 58.1
GTEX-11O72-2126-SM-5N9FO 57.8
GTEX-T2YK-2226-SM-32QPT 57.1
GTEX-11EI6-0626-SM-5985T 56.7
GTEX-Q2AG-0326-SM-48U1O 56.4
GTEX-ZV6S-1826-SM-5NQ8D 56.4
GTEX-12WSB-0626-SM-59HJO 56.3
GTEX-T5JC-2126-SM-32PMO 56.3
GTEX-ZVE2-1226-SM-5NQ8R 55.9
GTEX-QMRM-1626-SM-4R1KV 55.5
GTEX-Y3IK-2326-SM-4WWDT 55.5
GTEX-XUJ4-1926-SM-4BOOV 55.1
GTEX-TMMY-0726-SM-33HBE 54.8
GTEX-ZVT4-1026-SM-57WC4 54.8
GTEX-12BJ1-1826-SM-5HL9N 54.7
GTEX-U3ZH-1426-SM-4DXSR 54.7
GTEX-ZXES-0826-SM-5E43C 54.5
GTEX-Y3I4-1526-SM-4TT7K 54.4
GTEX-11ZTT-2326-SM-5EQLG 54.1
GTEX-ZLV1-1426-SM-4WWES 54.0
GTEX-UPK5-2326-SM-3P5Z8 53.9
GTEX-147F4-2826-SM-5NQBN 53.8
GTEX-12WSK-2226-SM-5GCO5 53.6
GTEX-133LE-1726-SM-5K7VQ 53.6
GTEX-ZDTT-2126-SM-5S2OJ 53.3
GTEX-132AR-0826-SM-5EGK6 53.1
GTEX-13PL6-2926-SM-5L3I2 53.0
GTEX-13FTY-2226-SM-5J1ND 52.9
GTEX-S32W-2026-SM-4AD6E 52.9
GTEX-W5X1-2326-SM-3GIL6 52.9
GTEX-YEC3-1026-SM-5IFI5 52.9
GTEX-1399U-1826-SM-5PNZ1 52.6
GTEX-VUSG-2226-SM-4KKZO 52.6
GTEX-XUW1-2326-SM-4BOO5 52.4
GTEX-13D11-1026-SM-5IJFB 52.3
GTEX-XMD1-0826-SM-4AT52 51.5
GTEX-ZT9W-2026-SM-51MRA 51.5
GTEX-S7SE-0826-SM-4AT4D 51.2
GTEX-UTHO-1026-SM-3GAF7 51.2
GTEX-13113-1726-SM-5GCOO 51.1
GTEX-WYVS-1726-SM-3NMAY 51.0
GTEX-S4UY-0726-SM-4AD6X 50.4
GTEX-TML8-1226-SM-32QON 50.3
GTEX-Y114-2026-SM-4TT7L 50.3
GTEX-PSDG-1626-SM-48TCQ 50.1
GTEX-SE5C-2126-SM-4BRUJ 50.1
GTEX-11I78-2226-SM-5PNYA 49.5
GTEX-Y5LM-1726-SM-4VDSX 49.2
GTEX-QDT8-0626-SM-48TYW 49.1
GTEX-1122O-1226-SM-5H113 48.9
GTEX-ZDYS-1126-SM-5K7UB 48.8
GTEX-RWS6-1926-SM-47JXY 48.6
GTEX-13FTX-1126-SM-5N9EN 48.5
GTEX-11OF3-1926-SM-59889 48.4
GTEX-Y5V5-2126-SM-4WWFO 48.4
GTEX-XUZC-1626-SM-4BRVP 48.3
GTEX-1192X-2326-SM-5987X 48.2
GTEX-11NV4-2026-SM-5N9DG 48.1
GTEX-139T6-1626-SM-5PNYZ 48.1
GTEX-11WQC-1726-SM-5GU4W 48.0
GTEX-ZZPU-0626-SM-5E43T 48.0
GTEX-11GS4-2126-SM-5A5KR 47.6
GTEX-13NZB-2126-SM-5MR4Y 47.2
GTEX-WYJK-1326-SM-3NB2T 46.9
GTEX-WRHU-0326-SM-3MJFY 46.8
GTEX-139T8-0826-SM-5L3DE 46.7
GTEX-145LT-0726-SM-5S2VM 46.3
GTEX-S33H-0326-SM-4AD6N 46.3
GTEX-13N11-1726-SM-5J1OJ 46.2
GTEX-ZF2S-2026-SM-5E461 46.2
GTEX-ZZ64-1226-SM-5E43R 46.2
GTEX-11P7K-0726-SM-5EGKX 46.1
GTEX-13CF2-2026-SM-5K7VI 45.8
GTEX-ZVT2-1826-SM-5NQ8W 45.4
GTEX-ZQUD-1926-SM-51MSA 45.3
GTEX-UJHI-1426-SM-3DB9C 45.2
GTEX-YFCO-1826-SM-4W1YH 45.0
GTEX-YJ8O-2226-SM-5IFHW 45.0
GTEX-ZEX8-2226-SM-57WC6 44.7
GTEX-132Q8-1426-SM-5EGK7 44.4
GTEX-YB5K-1626-SM-5IFIN 44.2
GTEX-ZPIC-1126-SM-5BC7F 44.1
GTEX-R55D-0826-SM-48FEA 44.0
GTEX-11DXW-0626-SM-5N9ER 43.9
GTEX-117XS-1926-SM-5GICO 43.8
GTEX-12ZZX-1126-SM-5EGKB 43.8
GTEX-ZYFC-0826-SM-5E44K 43.8
GTEX-WFON-1826-SM-3GILG 43.6
GTEX-X15G-1626-SM-3NMB3 43.6
GTEX-ZWKS-2826-SM-5NQ74 43.6
GTEX-YFC4-1426-SM-5IFJG 43.5
GTEX-ZVZQ-0826-SM-51MRF 43.5
GTEX-117YX-1426-SM-5H12H 43.1
GTEX-11P81-1926-SM-5BC53 43.1
GTEX-131XW-0726-SM-5EGK3 42.9
GTEX-R53T-1526-SM-48FEK 42.7
GTEX-14AS3-1626-SM-5S2OY 42.5
GTEX-ZQG8-0726-SM-5P9H9 42.3
GTEX-11GSO-1926-SM-5A5K3 42.2
GTEX-XGQ4-0926-SM-4AT4U 41.9
GTEX-11PRG-0826-SM-5EQ6A 41.8
GTEX-144GL-2026-SM-5LU3O 41.8
GTEX-S341-1526-SM-4AD6K 41.8
GTEX-12KS4-0126-SM-5Q5A5 41.7
GTEX-11P82-1326-SM-5HL62 41.5
GTEX-132NY-0826-SM-5K7Y7 41.4
GTEX-Y111-2026-SM-4SOJA 41.1
GTEX-ZUA1-1526-SM-59HLS 41.0
GTEX-T5JW-2026-SM-4DM63 40.8
GTEX-WXYG-2226-SM-4E3IM 40.7
GTEX-XYKS-1326-SM-4BRUN 40.4
GTEX-11NSD-0926-SM-5N9DR 39.9
GTEX-YB5E-1726-SM-5IFJ3 38.8
GTEX-139TU-0626-SM-5KM3X 38.5
GTEX-QVJO-1826-SM-447C9 38.5
GTEX-145MN-1926-SM-5SIAI 37.5
GTEX-T6MN-0726-SM-32PML 37.3
GTEX-U3ZN-1926-SM-4DXSG 37.0
GTEX-11EQ9-1826-SM-5Q5AJ 36.9
GTEX-131YS-0626-SM-5EGKL 36.9
GTEX-XQ8I-2426-SM-4WAXY 36.8
GTEX-13FTW-1426-SM-5LZWZ 36.4
GTEX-Y8E4-1626-SM-5S2MW 36.3
GTEX-11DXY-2326-SM-5GICW 35.7
GTEX-11ONC-2126-SM-5HL6E 34.3
GTEX-XQ3S-1326-SM-4BOPQ 32.8
GTEX-ZAB4-2526-SM-5HL8M 32.3
GTEX-ZDXO-0126-SM-5S2ND 32.2
GTEX-WY7C-2726-SM-3NB3P 31.4
GTEX-11ZUS-0826-SM-5FQUY 30.9
GTEX-ZYT6-0126-SM-5E45J 30.7
GTEX-XMK1-1126-SM-4IHJ8 29.8
GTEX-11DXZ-1926-SM-5GZZL 29.6
GTEX-ZVTK-0326-SM-51MRR 28.6
GTEX-14ABY-2126-SM-5QGQZ 20.3
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

138.8

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 138.8
FF:10080-102A8 77 years, female 138.8

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