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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:57.5TPM
GTEx:12.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Not detected
 

Antibody staining

Antibody HPA001671

 

Antibody HPA058603

 

Antibody CAB003859

 

Antibody CAB068241

 

Antibody CAB068242

 

Endothelial cells

Medium   Low   Low   Not detected   Medium  

Glial cells

Low   Not detected   Not detected   Not detected   Not detected  

Neuronal cells

Low   Not detected   Not detected   Not detected   Low  

Neuropil

Not detected   Not detected   Not detected   Not detected   Not detected  
         
         
         

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

57.5

N/A Male, age 5
Sample 1
TPM: 51.2
overview Female, age 40
Sample 2
TPM: 57.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 63.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

12.0

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 12.6
Samples: 114

Max RPKM: 30
Min RPKM: 6.2
Std RPKM: 5.2
Median RPKM: 10.9
GTEX-13OVJ-2826-SM-5L3GW 30.0
GTEX-144FL-3026-SM-5O99C 29.7
GTEX-11WQK-3026-SM-5EQL6 26.2
GTEX-X585-3026-SM-46MWF 26.2
GTEX-ZZPT-3026-SM-5GZXH 26.1
GTEX-11OC5-0726-SM-5P9JK 23.5
GTEX-11TTK-2926-SM-5PNYP 23.4
GTEX-13JVG-3126-SM-5L3FH 22.4
GTEX-13PVQ-3026-SM-5SI93 22.2
GTEX-13IVO-2926-SM-5L3CZ 21.6
GTEX-1445S-3026-SM-5O9BR 21.3
GTEX-11O72-2926-SM-5BC4V 20.7
GTEX-13NYC-2826-SM-5K7WR 20.7
GTEX-13NYS-3126-SM-5KLYV 20.5
GTEX-NPJ8-1526-SM-2D7VU 20.2
GTEX-132Q8-3026-SM-5PNVG 19.0
GTEX-NPJ7-2726-SM-2I3FT 18.2
GTEX-R55F-1326-SM-5S2V4 18.2
GTEX-WHSE-3026-SM-3P5ZH 18.2
GTEX-WWYW-3126-SM-3NB39 17.9
GTEX-13JUV-2926-SM-5LZX7 17.4
GTEX-OXRN-2426-SM-2I5EQ 17.2
GTEX-12WSA-2926-SM-5EQ4D 16.5
GTEX-PWO3-0926-SM-2I5EY 16.3
GTEX-139T8-1026-SM-5J2MC 15.6
GTEX-13X6K-2926-SM-5Q5D5 14.6
GTEX-13FHO-3026-SM-5J1O9 14.3
GTEX-QVUS-2826-SM-3GADB 13.7
GTEX-ZYFD-3026-SM-5E44C 13.7
GTEX-1192X-3126-SM-5N9BY 13.5
GTEX-11EI6-3026-SM-5GZZO 13.2
GTEX-ZAJG-3126-SM-5HL9J 13.1
GTEX-QMR6-1426-SM-32PLA 13.0
GTEX-11GSP-3226-SM-5986O 12.9
GTEX-11ONC-2926-SM-5P9JM 12.9
GTEX-12ZZW-2926-SM-5LZUP 12.9
GTEX-N7MT-1126-SM-5SI7V 12.7
GTEX-WZTO-2926-SM-3NM9I 12.7
GTEX-1128S-2726-SM-5H12C 12.4
GTEX-12WSD-3126-SM-5HL7P 12.2
GTEX-13OVH-3026-SM-5MR4N 12.2
GTEX-13QIC-2926-SM-5J2NF 12.2
GTEX-13OW8-2826-SM-5L3GC 12.0
GTEX-YFC4-3126-SM-5PNV6 12.0
GTEX-1117F-3226-SM-5N9CT 11.8
GTEX-145LS-3126-SM-5Q5BY 11.7
GTEX-RU72-3026-SM-5SI7Y 11.7
GTEX-13FXS-3126-SM-5J2NN 11.6
GTEX-QVJO-1426-SM-2S1QY 11.4
GTEX-UTHO-3026-SM-3GAFB 11.4
GTEX-X4XX-3026-SM-3NMB2 11.4
GTEX-1399T-3026-SM-5KLZC 11.3
GTEX-QDT8-2926-SM-32PKC 11.2
GTEX-13PL6-3126-SM-5LUAR 11.1
GTEX-14A5I-2926-SM-5Q5CQ 11.1
GTEX-11EMC-3226-SM-5EGKW 11.0
GTEX-11GSO-2926-SM-5HL73 10.9
GTEX-12ZZZ-3026-SM-5BC67 10.9
GTEX-T5JC-2426-SM-3NMDB 10.9
GTEX-131XW-3126-SM-5LZUC 10.8
GTEX-13O3O-3126-SM-5KM3H 10.8
GTEX-ZVT3-3026-SM-5E43N 10.8
GTEX-11DXY-3226-SM-5GIDE 10.6
GTEX-12ZZY-3026-SM-5GCOU 10.5
GTEX-13G51-3026-SM-5IJB8 10.5
GTEX-XLM4-3026-SM-4AT6L 10.4
GTEX-13OW7-3026-SM-5L3GY 10.3
GTEX-14BMV-3026-SM-5S2PQ 10.3
GTEX-13S7M-3126-SM-5RQJQ 10.2
GTEX-XOTO-3026-SM-4B65M 10.1
GTEX-11GS4-3126-SM-5A5LH 10.0
GTEX-11NUK-2926-SM-5A5MD 9.8
GTEX-13OW6-3026-SM-5J2MI 9.8
GTEX-111FC-3126-SM-5GZZ2 9.7
GTEX-13FHP-3026-SM-5IJBS 9.7
GTEX-ZUA1-3026-SM-59HJC 9.6
GTEX-12126-1026-SM-5P9JJ 9.5
GTEX-Q2AG-2926-SM-2HMJ3 9.5
GTEX-12ZZX-2926-SM-5GCOQ 9.4
GTEX-TSE9-3026-SM-3DB76 9.4
GTEX-ZAK1-3026-SM-5S2MJ 9.4
GTEX-11OF3-2926-SM-5HL78 9.2
GTEX-13FLW-1426-SM-5K7YE 9.2
GTEX-13VXU-2926-SM-5LU5C 9.2
GTEX-14ASI-3026-SM-5S2PN 9.2
GTEX-145MF-2726-SM-5O995 9.0
GTEX-144GL-3026-SM-5Q5CW 8.9
GTEX-11DXW-1126-SM-5H12Q 8.7
GTEX-11PRG-2926-SM-5987A 8.7
GTEX-13O3Q-2926-SM-5KM45 8.7
GTEX-ZE7O-3126-SM-5HL5X 8.5
GTEX-Y111-2726-SM-4TT3N 8.4
GTEX-Y8DK-0826-SM-4TT3T 8.4
GTEX-1313W-3126-SM-5LZUI 8.3
GTEX-PVOW-2526-SM-2XCF7 8.3
GTEX-13NYB-3026-SM-5IJD7 8.2
GTEX-145MG-3026-SM-5RQJA 8.2
GTEX-RNOR-2326-SM-2TF4I 8.2
GTEX-147GR-3026-SM-5S2ML 8.1
GTEX-T6MN-2626-SM-32PMQ 8.1
GTEX-WL46-2926-SM-3LK82 8.0
GTEX-YJ89-3026-SM-5IFJI 8.0
GTEX-117XS-3026-SM-5N9CA 7.9
GTEX-13X6J-3026-SM-5Q5CU 7.9
GTEX-12WSC-3026-SM-5GCNF 7.7
GTEX-12WSH-3026-SM-5CVNI 7.6
GTEX-131YS-3126-SM-5KLYT 7.6
GTEX-145MH-3026-SM-5Q5DZ 7.6
GTEX-T2IS-3026-SM-32QPM 7.6
GTEX-WVLH-3026-SM-3MJG9 7.6
GTEX-13SLX-3126-SM-5S2Q5 7.4
GTEX-11ZUS-2926-SM-5FQSL 7.0
GTEX-11NV4-2126-SM-5N9DS 6.2
GTEX-Z93S-2926-SM-57WB9 6.2
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 11.5
Samples: 108

Max RPKM: 42.5
Min RPKM: 5.6
Std RPKM: 5.7
Median RPKM: 9.8
GTEX-13N2G-0011-R10a-SM-5MR34 42.5
GTEX-13OVJ-0011-R10b-SM-5L3HT 35.8
GTEX-X4EP-0011-R10B-SM-4QASJ 31.0
GTEX-1445S-0011-R10a-SM-5PNWB 21.4
GTEX-11WQK-0011-R10a-SM-5BC6R 21.1
GTEX-QVUS-0011-R10A-SM-3GIK3 21.1
GTEX-XMD1-0011-R10A-SM-4AT4A 21.1
GTEX-NL4W-0011-R10A-SM-2I3DY 20.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 19.2
GTEX-13QJC-0011-R10a-SM-5SI63 18.9
GTEX-NPJ8-0011-R10A-SM-2YUMO 18.4
GTEX-X585-0011-R10A-SM-46MUY 17.3
GTEX-13FHO-0011-R10b-SM-5J2MM 17.1
GTEX-WWYW-0011-R10A-SM-3NB35 16.7
GTEX-12WSA-0011-R10b-SM-5P9ET 16.6
GTEX-X261-0011-R10B-SM-4E3JT 16.5
GTEX-13X6I-0011-R10a-SM-5PNWI 15.8
GTEX-T5JC-0011-R10A-SM-32PM2 15.6
GTEX-13X6K-0011-R10a-SM-5P9JR 15.5
GTEX-13SLW-0011-R10a-SM-5S2UI 14.8
GTEX-13N1W-0011-R10b-SM-5MR4H 14.4
GTEX-13NYS-0011-R10a-SM-5MR4S 14.3
GTEX-11ZUS-0011-R10b-SM-5BC79 14.1
GTEX-11H98-0011-R10b-SM-5NQ98 13.4
GTEX-13OW8-0011-R10a-SM-5L3H6 13.4
GTEX-XLM4-0011-R10A-SM-4AT5P 13.3
GTEX-147F4-0011-R10b-SM-5S2WC 13.1
GTEX-132Q8-0011-R10b-SM-5DUWZ 13.0
GTEX-13JUV-0011-R10b-SM-5LZXR 13.0
GTEX-OXRN-0011-R10A-SM-2I5GC 13.0
GTEX-ZF28-0011-R10a-SM-4WWEH 12.8
GTEX-QVJO-0011-R10A-SM-2S1QJ 12.6
GTEX-13JVG-0011-R10b-SM-5KM2P 12.5
GTEX-P44H-0011-R10A-SM-2XCEK 12.5
GTEX-QMR6-0011-R10A-SM-32PKO 12.1
GTEX-QDT8-0011-R10A-SM-32PKG 12.0
GTEX-14BIL-0011-R10a-SM-5SI75 11.9
GTEX-N7MT-0011-R10A-SM-2I3E1 11.9
GTEX-13CZV-0011-R10b-SM-5LZYD 11.4
GTEX-11GSP-0011-R10a-SM-5NQ7J 11.0
GTEX-1477Z-0011-R10b-SM-5S2RF 10.9
GTEX-12WSF-0011-R10a-SM-5LZVH 10.8
GTEX-X4XX-0011-R10B-SM-46MWO 10.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 10.7
GTEX-13FLV-0011-R10b-SM-5LZZ2 10.4
GTEX-13OVL-0011-R10a-SM-5L3GS 10.3
GTEX-12WSM-0011-R10a-SM-5DUWV 10.2
GTEX-RVPU-0011-R10A-SM-2XCAH 10.2
GTEX-ZAB4-0011-R10a-SM-4SOKH 10.2
GTEX-14753-0011-R10b-SM-5S2WE 10.1
GTEX-YFC4-0011-R10a-SM-4SOK5 10.1
GTEX-13IVO-0011-R10a-SM-5LZY3 10.0
GTEX-145LS-0011-R10a-SM-5PNUQ 9.9
GTEX-ZV68-0011-R10a-SM-51MT7 9.9
GTEX-11WQC-0011-R10a-SM-57WCT 9.7
GTEX-WVLH-0011-R10A-SM-3MJFM 9.5
GTEX-13NZA-0011-R10b-SM-5KM54 9.4
GTEX-13S7M-0011-R10b-SM-5PNZB 9.4
GTEX-131YS-0011-R10b-SM-5EQ5N 9.3
GTEX-TSE9-0011-R10A-SM-3DB7O 9.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 9.1
GTEX-ZDXO-0011-R10a-SM-4WWD8 9.1
GTEX-145LU-0011-R10a-SM-5PNWJ 9.0
GTEX-S7SE-0011-R10A-SM-2XCDF 9.0
GTEX-OXRO-0011-R10A-SM-2I5EH 8.8
GTEX-131XH-0011-R10a-SM-5EGLJ 8.7
GTEX-145MG-0011-R10a-SM-5PNWG 8.7
GTEX-NL3H-0011-R10A-SM-2I3E9 8.6
GTEX-13FLW-0011-R10b-SM-5LZZF 8.5
GTEX-13QIC-0011-R10a-SM-5O9C7 8.5
GTEX-WZTO-0011-R10B-SM-4E3KB 8.5
GTEX-12ZZW-0011-R10b-SM-5HL9X 8.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 8.4
GTEX-T6MN-0011-R10A-SM-32QP7 8.3
GTEX-145MH-0011-R10b-SM-5PNUK 8.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC 8.1
GTEX-13RTJ-0011-R10b-SM-5O9CW 8.1
GTEX-147GR-0011-R10b-SM-5S2UM 8.1
GTEX-ZE7O-0011-R10a-SM-57WAZ 8.0
GTEX-ZUA1-0011-R10a-SM-51MT6 8.0
GTEX-12WSH-0011-R10a-SM-5LZUS 7.8
GTEX-N7MS-0011-R10A-SM-2HMJK 7.8
GTEX-ZVZQ-0011-R10b-SM-51MRT 7.8
GTEX-13FXS-0011-R10a-SM-5J2MA 7.7
GTEX-13G51-0011-R10b-SM-5LZYF 7.7
GTEX-13OW6-0011-R10a-SM-5L3HE 7.7
GTEX-Y8DK-0011-R10A-SM-4SOK1 7.7
GTEX-WL46-0011-R10A-SM-3MJFQ 7.6
GTEX-139TS-0011-R10a-SM-5K7TU 7.5
GTEX-12WSE-0011-R10b-SM-5P9JV 7.3
GTEX-12ZZY-0011-R10b-SM-5HL7W 7.3
GTEX-12126-0011-R10b-SM-5BC6T 7.2
GTEX-13O3O-0011-R10a-SM-5LUA9 7.2
GTEX-14ASI-0011-R10b-SM-5S2VZ 7.2
GTEX-ZVT3-0011-R10b-SM-57WB6 7.2
GTEX-12WSD-0011-R10b-SM-5GU79 7.1
GTEX-13O3Q-0011-R10b-SM-5KM39 7.1
GTEX-YJ89-0011-R10a-SM-4SOK9 7.1
GTEX-13NYB-0011-R10a-SM-5KM43 6.8
GTEX-13X6J-0011-R10b-SM-5PNWA 6.7
GTEX-13OW7-0011-R10a-SM-5L3H3 6.6
GTEX-131XW-0011-R10a-SM-5DUVA 6.5
GTEX-ZXG5-0011-R10a-SM-57WDD 6.4
GTEX-1313W-0011-R10b-SM-5DUXA 6.3
GTEX-14BIN-0011-R10a-SM-5S2UA 6.2
GTEX-Z93S-0011-R10a-SM-4RGNM 6.2
GTEX-12WSC-0011-R10a-SM-5GU57 5.7
GTEX-13SLX-0011-R10a-SM-5P9HV 5.6
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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