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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:17.5RPKM
FANTOM5:38.5Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA014529

 

Glial cells

Medium  

Neuronal cells

High  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

17.5

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 17.5
Samples: 117

Max RPKM: 29.9
Min RPKM: 4.8
Std RPKM: 6.3
Median RPKM: 18.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 29.9
GTEX-13G51-0011-R5a-SM-5L3EB 29.7
GTEX-X585-0011-R5A-SM-46MVI 29.0
GTEX-145MH-0011-R5a-SM-5P9JT 28.8
GTEX-13SLX-0011-R5a-SM-5O9BV 27.5
GTEX-13VXU-0011-R5a-SM-5O9D7 27.3
GTEX-1399T-0011-R5b-SM-5IJDK 26.9
GTEX-14BIM-0011-R5b-SM-5S2RM 26.3
GTEX-QVJO-0011-R5A-SM-2S1QM 26.3
GTEX-ZUA1-0011-R5b-SM-51MTG 26.3
GTEX-12WSC-0011-R5b-SM-5CVNS 25.5
GTEX-11GSP-0011-R5a-SM-57WBE 25.3
GTEX-13FXS-0011-R5b-SM-5LZYE 25.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 24.8
GTEX-UTHO-0011-R5A-SM-3GIJD 24.1
GTEX-13FLW-0011-R5a-SM-5LZX6 24.0
GTEX-1313W-0011-R5b-SM-5L3EP 23.8
GTEX-WL46-0011-R5A-SM-3LK6V 23.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 23.6
GTEX-13S7M-0011-R5b-SM-5P9HS 23.5
GTEX-N7MS-0011-R5a-SM-2HMK8 23.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 23.2
GTEX-WZTO-0011-R5B-SM-3NMC5 23.2
GTEX-13OVL-0011-R5b-SM-5L3FU 23.1
GTEX-131YS-0011-R5b-SM-5K7YB 23.0
GTEX-T6MN-0011-R5A-SM-32QPD 23.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 22.9
GTEX-13X6J-0011-R5b-SM-5PNWT 22.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 22.4
GTEX-13X6K-0011-R5b-SM-5PNUE 22.4
GTEX-13OW7-0011-R5b-SM-5O9DM 22.3
GTEX-14ABY-0011-R5b-SM-5SI7B 22.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 22.2
GTEX-TSE9-0011-R5A-SM-3DB7J 21.8
GTEX-WWYW-0011-R5A-SM-3NB3E 21.7
GTEX-13NYB-0011-R5a-SM-5MR45 21.6
GTEX-145LS-0011-R5a-SM-5SI65 21.6
GTEX-Z93S-0011-R5b-SM-4RGNI 21.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 21.3
GTEX-WVLH-0011-R5A-SM-3MJFW 21.3
GTEX-S7SE-0011-R5A-SM-2XCDA 21.0
GTEX-13FLV-0011-R5a-SM-5LZWT 20.9
GTEX-RU72-0011-R5A-SM-2TF6U 20.9
GTEX-13O3O-0011-R5b-SM-5KM44 20.8
GTEX-13OW6-0011-R5a-SM-5O9BK 20.8
GTEX-12WSF-0011-R5a-SM-5HL8K 20.4
GTEX-13OVH-0011-R5b-SM-5KM4L 20.4
GTEX-RVPV-0011-R5A-SM-2TF69 20.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 20.1
GTEX-P44H-0011-R5A-SM-2XCEX 19.9
GTEX-N7MT-0011-R5a-SM-2I3G6 19.7
GTEX-R55E-0011-R5A-SM-2TC5N 19.7
GTEX-11NV4-0011-R5a-SM-5NQ88 19.4
GTEX-11OF3-0011-R5a-SM-57WB4 19.2
GTEX-13JUV-0011-R5a-SM-5LZY5 19.0
GTEX-XOTO-0011-R5A-SM-4B657 19.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 18.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 18.4
GTEX-13OW5-0011-R5b-SM-5L3FR 18.2
GTEX-T5JC-0011-R5A-SM-32PLK 18.2
GTEX-OHPN-0011-R5A-SM-2I5FF 17.4
GTEX-13CZV-0011-R5a-SM-5K7XA 17.3
GTEX-T2IS-0011-R5A-SM-32QP4 17.3
GTEX-11H98-0011-R5b-SM-57WCF 17.0
GTEX-PVOW-0011-R5A-SM-32PL7 17.0
GTEX-X4XX-0011-R5A-SM-46MWN 16.9
GTEX-12WSD-0011-R5b-SM-5CVNG 16.8
GTEX-132Q8-0011-R5a-SM-5IJDM 16.7
GTEX-139TT-0011-R5b-SM-5K7W8 16.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 16.1
GTEX-13X6I-0011-R5a-SM-5PNWW 16.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 16.0
GTEX-12ZZX-0011-R5a-SM-5HL89 15.9
GTEX-13NYS-0011-R5a-SM-5MR4D 15.9
GTEX-NL4W-0011-R5a-SM-2I3GD 15.8
GTEX-14BIN-0011-R5b-SM-5SI78 15.7
GTEX-YFC4-0011-R5a-SM-4RGLR 15.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 15.2
GTEX-ZE7O-0011-R5a-SM-57WBO 14.9
GTEX-RVPU-0011-R5A-SM-2XCAD 14.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 14.8
GTEX-13JVG-0011-R5a-SM-5MR4O 13.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 13.9
GTEX-12WSB-0011-R5b-SM-5GU67 13.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 13.7
GTEX-ZXG5-0011-R5b-SM-57WBN 13.0
GTEX-XMD1-0011-R5A-SM-4AT47 12.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 12.7
GTEX-X261-0011-R5A-SM-3NMB4 12.5
GTEX-OXRN-0011-R5A-SM-2I5EF 11.9
GTEX-YJ89-0011-R5a-SM-4V6GM 11.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 11.4
GTEX-13CIG-0011-R5b-SM-5L3F2 11.0
GTEX-144GO-0011-R5a-SM-5PNUR 10.6
GTEX-NL3H-0011-R5a-SM-2I3GB 10.5
GTEX-QMR6-0011-R5A-SM-32PKT 10.3
GTEX-11WQC-0011-R5a-SM-5BC74 10.1
GTEX-144GL-0011-R5b-SM-5PNUJ 10.0
GTEX-13112-0011-R5b-SM-5DUV8 9.3
GTEX-NPJ7-0011-R5a-SM-33HBK 9.1
GTEX-ZVT3-0011-R5a-SM-51MSI 9.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 8.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 8.5
GTEX-13FHP-0011-R5b-SM-5LZY2 8.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 8.0
GTEX-12WSH-0011-R5b-SM-5P9F3 7.8
GTEX-12WSA-0011-R5b-SM-5GU5I 7.4
GTEX-139TS-0011-R5b-SM-5J2MZ 7.4
GTEX-1445S-0011-R5a-SM-5PNUS 7.3
GTEX-11UD1-0011-R5b-SM-5P9FP 6.7
GTEX-139T8-0011-R5b-SM-5J1MO 6.3
GTEX-S7PM-0011-R5A-SM-3NM8G 6.0
GTEX-ZV68-0011-R5a-SM-4YCDW 5.9
GTEX-145MG-0011-R5b-SM-5S2VU 5.6
GTEX-1477Z-0011-R5b-SM-5PNUO 5.6
GTEX-13CF2-0011-R5a-SM-5LZWS 5.5
GTEX-13NZA-0011-R5b-SM-5KM4K 4.8
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

38.5

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 38.5
FF:10164-103B2 76 years, female 39.6
FF:10379-105H1 89 years, female 37.4

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