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SDC2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:122.5TPM
GTEx:33.9RPKM
FANTOM5:183.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Chondrocytes:Medium
Fibroblasts:High
 

Antibody staining

Antibody CAB025123

  

Adipocytes

 High  

Chondrocytes

 Medium  

Fibroblasts

 High  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Fibroblasts:High
Peripheral nerve:Low
 

Antibody staining

Antibody CAB025123

  

Adipocytes

 High  

Fibroblasts

 High  

Peripheral nerve

 Low  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

122.5
N/A Female, age 80
Sample 1
TPM: 113.0
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 139.7
N/A Female, age 57
Sample 3
TPM: 126.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 95.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 138.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

33.9

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 38.0
Samples: 350

Max RPKM: 129.4
Min RPKM: 16.5
Std RPKM: 12.5
Median RPKM: 36.3
GTEX-QDT8-0226-SM-32PL4 129.4
GTEX-13NYS-0226-SM-5MR49 126.8
GTEX-14E6C-0226-SM-5S2N3 85.8
GTEX-13JVG-0226-SM-5J1MW 80.6
GTEX-132AR-0226-SM-5IJBE 71.8
GTEX-13FHO-0326-SM-5IJBH 71.1
GTEX-13YAN-0426-SM-5O9DR 69.8
GTEX-111VG-2326-SM-5N9BK 69.7
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 27.5
Samples: 227

Max RPKM: 70.7
Min RPKM: 12.4
Std RPKM: 8.7
Median RPKM: 26.5
GTEX-13PVQ-2226-SM-5L3G9 70.7
GTEX-13OVJ-0926-SM-5K7U1 65.1
GTEX-WFJO-1026-SM-3GIKL 55.1
GTEX-ZTPG-2326-SM-57WFL 53.7
GTEX-13FHO-2026-SM-5J1OA 51.5
GTEX-ZDXO-2326-SM-5LU9W 49.0
GTEX-ZF2S-1526-SM-5S2OO 48.0
GTEX-ZDTS-1826-SM-5S2N6 44.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

183.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 183.6
FF:10010-101C1 65,65,76 years, mixed 183.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.