Tissue expression of SDC2 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	56.5	TPM
GTEx:	5.2	RPKM
FANTOM5:	56.9	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

High

Antibody staining	Antibody CAB025123
Squamous epithelial cells	High

ESOPHAGUS - HPA RNA-seq

Average TPM	56.5

Female, age 70

Sample 1
TPM: 31.4

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 88.3

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 49.8

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	5.2

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 5.2

Samples: 286

Max RPKM: 15.5
Min RPKM: 0.7
Std RPKM: 2.9
Median RPKM: 4.7

GTEX-145LS-1826-SM-5LUAZ

15.5

GTEX-R45C-1226-SM-48FEE

15.2

GTEX-RTLS-1126-SM-46MUQ

15.2

GTEX-13O21-0626-SM-5IJDI

14.9

GTEX-11DYG-1326-SM-5N9DO

14.6

GTEX-13X6I-1026-SM-5LU4C

14.5

GTEX-11VI4-0526-SM-5EQ48

13.3

GTEX-13OVJ-1226-SM-5L3HA

13.3

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	56.9

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 56.9

FF:10015-101C6

68,74,75 years, mixed

56.9