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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:240.3TPM
GTEx:41.5RPKM
FANTOM5:242.9Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Medium
Hepatocytes:Medium
 

Antibody staining

Antibody CAB025123

 

Bile duct cells

Medium  

Hepatocytes

Medium  
 
 
 

LIVER - HPA RNA-seq

Average TPM

240.3

N/A Female, age 60
Sample 1
TPM: 236.7
overview Male, age 54
Sample 2
TPM: 258.3
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 230.1
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 274.0
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 171.7
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 258.3
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 186.6
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 172.5
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 207.1
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 408.0
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

41.5

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 41.5
Samples: 119

Max RPKM: 78.1
Min RPKM: 15.1
Std RPKM: 14.1
Median RPKM: 40.4
GTEX-13VXU-0926-SM-5IFFH 78.1
GTEX-11OF3-0726-SM-5BC4Z 75.9
GTEX-147JS-1126-SM-5RQIW 73.4
GTEX-T6MN-1226-SM-3NMA5 71.1
GTEX-14AS3-0126-SM-5Q5F4 70.5
GTEX-11WQC-0726-SM-5EQMR 67.5
GTEX-13SLX-1226-SM-5S2Q6 64.1
GTEX-YECK-1926-SM-4W21H 64.0
GTEX-R53T-0326-SM-48FEC 63.1
GTEX-ZYT6-0626-SM-5E45V 62.9
GTEX-131YS-1626-SM-5HL6C 62.5
GTEX-14DAQ-1726-SM-5S2R2 62.2
GTEX-QEG4-1826-SM-4R1JN 61.3
GTEX-QESD-2026-SM-447BI 59.7
GTEX-U3ZN-0226-SM-3DB8D 59.6
GTEX-ZF2S-3026-SM-4WWCH 59.6
GTEX-S33H-1626-SM-4AD68 56.8
GTEX-11DXY-0526-SM-5EGGQ 56.6
GTEX-SJXC-1226-SM-4DM78 56.3
GTEX-13112-1426-SM-5EGH8 56.0
GTEX-13NZ9-1326-SM-5MR3V 55.4
GTEX-11NV4-1326-SM-5HL6V 54.7
GTEX-Q2AG-1126-SM-48U1P 54.6
GTEX-1399R-1226-SM-5P9GF 54.4
GTEX-12WSD-1426-SM-5GCN9 54.2
GTEX-13FTZ-0726-SM-5IFFY 53.1
GTEX-145MF-0826-SM-5QGQA 53.1
GTEX-1399T-0826-SM-5IFES 52.7
GTEX-ZAB5-0426-SM-5CVMI 52.1
GTEX-11ZTS-1426-SM-5EQMM 51.8
GTEX-QV44-0326-SM-4R1KD 51.0
GTEX-1212Z-0226-SM-59HLF 50.7
GTEX-ZVT3-1626-SM-5GU66 50.2
GTEX-13OW6-2626-SM-5IFF2 50.0
GTEX-ZPU1-0826-SM-57WG2 50.0
GTEX-Y5V5-0926-SM-4VBPZ 49.7
GTEX-13NYB-1026-SM-5IFH3 48.4
GTEX-145LU-1326-SM-5LU9N 48.0
GTEX-12WSI-0226-SM-5GCNA 47.6
GTEX-TKQ2-1726-SM-4DXUP 47.4
GTEX-14E1K-0326-SM-5S2PE 46.8
GTEX-132NY-0926-SM-5P9G3 46.6
GTEX-147F4-1426-SM-5LUA8 45.5
GTEX-RNOR-1426-SM-48FDJ 45.3
GTEX-OOBJ-0826-SM-3NB2K 45.0
GTEX-RU72-1426-SM-46MUF 43.8
GTEX-139TS-1426-SM-5IFJD 43.3
GTEX-11DXZ-0126-SM-5EGGY 42.7
GTEX-Y5LM-0426-SM-4VBRO 42.4
GTEX-XOTO-0826-SM-4B65O 42.2
GTEX-X261-1726-SM-4PQYT 42.1
GTEX-11NUK-1226-SM-5P9GM 41.8
GTEX-12KS4-1326-SM-5LUB3 41.7
GTEX-12WSM-0726-SM-5GCOW 41.7
GTEX-11ZUS-2526-SM-59872 41.5
GTEX-146FH-1526-SM-5NQBU 41.4
GTEX-13FTW-1126-SM-5J2NV 41.2
GTEX-PX3G-0826-SM-48TZS 41.1
GTEX-WZTO-0626-SM-4PQYY 40.9
GTEX-ZZPU-0426-SM-5GZYH 40.4
GTEX-RN64-1826-SM-48FDV 40.1
GTEX-139TU-0826-SM-5IJFG 40.0
GTEX-RTLS-1326-SM-46MUN 40.0
GTEX-UPK5-1426-SM-4JBHH 39.0
GTEX-1269C-0626-SM-5FQSS 38.9
GTEX-14753-1626-SM-5NQ9L 38.5
GTEX-13QJC-0726-SM-5RQJK 38.3
GTEX-11ZVC-0726-SM-5FQT9 37.6
GTEX-14A5I-1726-SM-5QGQ5 37.2
GTEX-P78B-1326-SM-3P611 37.2
GTEX-S4Z8-0526-SM-4AD4T 37.1
GTEX-13FLV-0326-SM-5N9DJ 36.9
GTEX-YB5E-0326-SM-5IFHU 36.7
GTEX-ZF29-2026-SM-4WWB7 36.3
GTEX-13N2G-0926-SM-5IFGJ 36.1
GTEX-WYVS-1926-SM-4PQZ2 35.8
GTEX-YFC4-1526-SM-5IFJS 35.7
GTEX-131XH-0626-SM-5LZWH 35.6
GTEX-Q734-0326-SM-48U15 35.6
GTEX-13NZB-0626-SM-5IFH6 35.4
GTEX-X4EO-1126-SM-4QARQ 34.8
GTEX-VUSG-0126-SM-4KL1X 34.4
GTEX-Z9EW-0426-SM-5CVM9 34.3
GTEX-RWSA-1426-SM-47JXA 33.7
GTEX-WFON-1726-SM-4LVMQ 32.8
GTEX-UTHO-2426-SM-4JBHD 32.7
GTEX-12WSL-0226-SM-5CVMJ 32.5
GTEX-UPIC-0926-SM-4IHLV 30.9
GTEX-ZVP2-0626-SM-51MSO 30.8
GTEX-ZVT4-0626-SM-5E45T 30.8
GTEX-11GSP-0626-SM-5986T 30.7
GTEX-RM2N-1926-SM-48FCU 30.6
GTEX-X4EP-1026-SM-4QAS5 30.5
GTEX-REY6-1226-SM-48FDR 29.6
GTEX-13PVR-0126-SM-5S2PY 29.3
GTEX-ZYY3-0626-SM-5NQ6W 29.0
GTEX-X3Y1-2726-SM-4PQZH 28.8
GTEX-XBEC-1526-SM-4AT68 28.3
GTEX-11EQ9-0526-SM-5A5JZ 27.8
GTEX-13N11-0926-SM-5IJG2 26.8
GTEX-ZTPG-1426-SM-51MT3 26.8
GTEX-WQUQ-1926-SM-4OOSA 26.7
GTEX-QEL4-1226-SM-447A4 26.6
GTEX-12696-0826-SM-5EGGE 23.7
GTEX-S32W-1926-SM-4AD63 23.0
GTEX-1497J-0726-SM-5Q5D1 22.9
GTEX-12ZZZ-1326-SM-59HKW 22.6
GTEX-13O3O-1826-SM-5IFGW 22.1
GTEX-145MO-2326-SM-5NQ9K 22.0
GTEX-12WSG-0626-SM-5FQTQ 21.6
GTEX-139YR-0226-SM-5IFEM 21.1
GTEX-ZAB4-0826-SM-5LU9D 21.0
GTEX-13113-1326-SM-5GCOI 19.8
GTEX-YEC4-0826-SM-5P9FV 19.5
GTEX-QDVN-0826-SM-48TZ2 18.1
GTEX-X4XY-1626-SM-46MVN 18.1
GTEX-131XE-0326-SM-5LZVO 17.5
GTEX-144GM-1326-SM-5LU5E 16.1
GTEX-14C38-1526-SM-5RQJ7 15.1
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

242.9

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 242.9
FF:10018-101C9 64,69,70 years, mixed 242.9

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