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Term
Gene name

Class

Subclass

Chromosome

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In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

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Score

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Antibodies

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CKAP2L
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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

CKAP2L

Gene description

Cytoskeleton associated protein 2-like

Protein class

Disease related genes
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Tissue enhanced (testis, bone marrow)
GTEx:Tissue enhanced (testis, esophagus)
FANTOM5:Tissue enhanced (testis, appendix)

Protein evidence

Evidence at protein level

Protein expression

Mainly cytoplasmic expression in several tissues.

DATA RELIABILITY

Data reliability
description

Pending external verification. Presumed off target binding observed and disregarded.

Reliability score

Uncertain based on 2 antibodies.
HPA039407 , HPA040057
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Oral mucosa

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (testis, bone marrow)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (testis, esophagus)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (testis, appendix)

GENE INFORMATION

Gene name

CKAP2L (HGNC Symbol)

Synonyms

FLJ40629, radmis

Description

Cytoskeleton associated protein 2-like (HGNC Symbol)

Entrez gene summary

The protein encoded by this gene is thought to be a mitotic spindle protein important to neural stem or progenitor cells. Mutations in this gene have been associated with spindle organization defects, including mitotic spindle defects, lagging chromosomes, and chromatin bridges. There is evidence that mutations in this gene are associated with Filippi syndrome, characterized by growth defects, microcephaly, intellectual disability, facial feature defects, and syndactyly. There is a pseudogene of this gene on chromosome 20. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2015]

Chromosome

2

Cytoband

q14.1

Chromosome location (bp)

112736607 - 112764677

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000169607 (version 83.38)

Entrez gene

150468

UniProt

Q8IYA6 (UniProt - Evidence at protein level)

neXtProt

NX_Q8IYA6

Antibodypedia

CKAP2L antibodies

PROTEIN BROWSER

CKAP2L-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

CKAP2L-001
ENSP00000305204
ENST00000302450
Q8IYA6 [Direct mapping]
Cytoskeleton-associated protein 2-like
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Predicted intracellular proteins
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000922 [spindle pole]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
Show all
745 aa
83.6 kDa
No 0

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