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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:29.9TPM
GTEx:27.5RPKM
FANTOM5:41.0Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA036322

 

Antibody HPA036323

 

Glandular cells

Medium   Low  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

29.9

overview Male, age 65
Sample 1
TPM: 29.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 29.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 28.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 32.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

27.5

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 27.5
Samples: 88

Max RPKM: 46
Min RPKM: 11.6
Std RPKM: 5.5
Median RPKM: 27.6
GTEX-148VJ-2226-SM-5NQ9M 46.0
GTEX-111YS-1426-SM-5GID8 45.8
GTEX-Y5LM-1626-SM-4VDTB 36.7
GTEX-11P7K-1626-SM-5GU63 36.0
GTEX-131XF-1326-SM-5GCMQ 35.5
GTEX-133LE-1426-SM-5IFH1 34.6
GTEX-13QBU-1926-SM-5IJEW 34.2
GTEX-WRHK-1026-SM-4MVOD 34.2
GTEX-VUSG-1726-SM-4KKZL 33.1
GTEX-13113-1226-SM-5EGHT 32.3
GTEX-13O61-1326-SM-5KM31 32.0
GTEX-ZVP2-1726-SM-5GU5P 31.8
GTEX-WH7G-1626-SM-4LVMY 31.5
GTEX-ZXES-1526-SM-5NQ95 31.4
GTEX-ZYFG-2026-SM-5E43Y 31.3
GTEX-11NSD-1726-SM-5N9C3 31.2
GTEX-11XUK-1426-SM-5EQMG 31.2
GTEX-12BJ1-1926-SM-5HL9Z 31.2
GTEX-ZLFU-1526-SM-4WWBT 30.9
GTEX-ZVZP-1826-SM-5GZXB 30.9
GTEX-14E6E-1626-SM-5RQI7 30.8
GTEX-WFJO-0926-SM-4LVM2 30.7
GTEX-13PL7-2626-SM-5IFH4 30.5
GTEX-11EQ9-1326-SM-5985X 30.4
GTEX-13RTK-0826-SM-5Q5C6 30.4
GTEX-11DXX-1626-SM-5H11H 30.0
GTEX-ZQG8-2526-SM-57WEQ 29.9
GTEX-YB5E-1526-SM-5IFIE 29.8
GTEX-ZTPG-2626-SM-57WFX 29.6
GTEX-ZP4G-1626-SM-57WGD 29.4
GTEX-VJYA-0926-SM-4KL1N 29.2
GTEX-ZZ64-0526-SM-5GZXM 29.1
GTEX-ZLV1-1126-SM-4WWBW 29.1
GTEX-YEC4-1726-SM-4W21E 29.0
GTEX-13O21-1026-SM-5IJDU 28.7
GTEX-WQUQ-2426-SM-4MVNW 28.5
GTEX-14DAR-1426-SM-5RQIR 28.5
GTEX-11P82-0826-SM-5P9GU 28.3
GTEX-ZTX8-0526-SM-59HLD 28.3
GTEX-ZEX8-1826-SM-57WBH 28.2
GTEX-13FH7-1226-SM-5IJFK 28.2
GTEX-139YR-2226-SM-5IFFW 28.1
GTEX-ZA64-1226-SM-5HL7B 27.9
GTEX-ZVT2-2126-SM-5NQ93 27.6
GTEX-ZC5H-2326-SM-4WAYT 27.6
GTEX-139T6-1026-SM-5IJGC 27.4
GTEX-145ME-0926-SM-5O9AR 27.3
GTEX-1399U-2126-SM-5IFEZ 27.1
GTEX-UPK5-2026-SM-4JBIM 27.0
GTEX-1192X-2526-SM-59868 27.0
GTEX-XUZC-1426-SM-4BRV3 27.0
GTEX-11I78-1126-SM-5A5K5 26.8
GTEX-XGQ4-1326-SM-4GIDU 26.7
GTEX-Z9EW-0926-SM-5CVMM 26.7
GTEX-Y9LG-1626-SM-5IFHM 26.4
GTEX-11VI4-1626-SM-5EQKO 26.3
GTEX-13D11-0726-SM-5LZZB 26.2
GTEX-X15G-1426-SM-4PQZK 26.1
GTEX-XAJ8-0526-SM-47JYK 25.8
GTEX-ZYWO-1526-SM-5SIAL 25.8
GTEX-131XG-1726-SM-5LZUR 25.8
GTEX-ZTSS-0926-SM-59865 25.8
GTEX-145LT-1026-SM-5LU9O 25.6
GTEX-X5EB-1626-SM-4E3IV 25.6
GTEX-XBED-1426-SM-4AT4G 25.5
GTEX-1399R-2026-SM-5K7WN 25.3
GTEX-1399S-2026-SM-5KM4B 25.0
GTEX-WFG8-1626-SM-4LVMB 24.9
GTEX-11DXZ-1326-SM-5H11X 24.6
GTEX-YF7O-1826-SM-5IFIU 24.6
GTEX-13FTW-2026-SM-5IJE2 24.3
GTEX-ZPCL-1726-SM-57WEO 23.7
GTEX-13CF3-1226-SM-5LZXN 23.5
GTEX-WFG7-1726-SM-4LVME 23.5
GTEX-XXEK-1026-SM-4BRUW 23.1
GTEX-1122O-1326-SM-5H11F 22.3
GTEX-ZPIC-2326-SM-57WDW 22.2
GTEX-Y114-1426-SM-4TT6W 21.5
GTEX-Y3IK-1726-SM-4YCCR 21.0
GTEX-13OVI-1926-SM-5IJCG 20.9
GTEX-13111-1426-SM-5DUW3 20.5
GTEX-12WSK-1526-SM-5CVNO 19.2
GTEX-ZF2S-1726-SM-57WFT 17.5
GTEX-XMK1-1826-SM-4B66F 16.4
GTEX-117YX-0326-SM-5GICL 16.3
GTEX-WEY5-1526-SM-4LMJF 14.1
GTEX-111CU-1326-SM-5NQ8L 14.0
GTEX-ZQUD-0926-SM-57WE3 11.6
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

41.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 41.0
FF:10024-101D6 15,40,85 years, mixed 41.0

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.