We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
MRAP
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:6.9TPM
GTEx:11.1RPKM
FANTOM5:89.6Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA011024

 

Adipocytes

Not detected  

Glandular cells

Medium  

Myoepithelial cells

Medium  
 
 

BREAST - HPA RNA-seq

Average TPM

6.9

overview Female, age 52
Sample 1
TPM: 4.6
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 22.9
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 0.0
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 0.0
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

11.1

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 11.1
Samples: 214

Max RPKM: 68.1
Min RPKM: 0
Std RPKM: 12.8
Median RPKM: 6.3
GTEX-WY7C-2726-SM-3NB3P 68.1
GTEX-ZQG8-0726-SM-5P9H9 50.1
GTEX-11P82-1326-SM-5HL62 49.6
GTEX-13CF3-2126-SM-5IFJP 45.6
GTEX-13FTW-1426-SM-5LZWZ 44.2
GTEX-YB5K-1626-SM-5IFIN 42.7
GTEX-ZPIC-1126-SM-5BC7F 42.5
GTEX-ZT9W-2026-SM-51MRA 41.0
GTEX-11ZTT-2326-SM-5EQLG 40.2
GTEX-132AR-0826-SM-5EGK6 38.3
GTEX-ZDYS-1126-SM-5K7UB 37.5
GTEX-11TUW-1826-SM-5BC5D 37.1
GTEX-117YX-1426-SM-5H12H 36.0
GTEX-S33H-0326-SM-4AD6N 36.0
GTEX-11I78-2226-SM-5PNYA 34.4
GTEX-13FTX-1126-SM-5N9EN 33.9
GTEX-YB5E-1726-SM-5IFJ3 33.6
GTEX-REY6-2426-SM-48FF5 31.5
GTEX-Y8E4-1626-SM-5S2MW 31.3
GTEX-ZDXO-0126-SM-5S2ND 31.0
GTEX-139T6-1626-SM-5PNYZ 30.7
GTEX-13S86-1226-SM-5S2OA 29.6
GTEX-SE5C-2126-SM-4BRUJ 29.5
GTEX-S32W-2026-SM-4AD6E 29.4
GTEX-XQ8I-2426-SM-4WAXY 28.7
GTEX-S4Q7-1126-SM-4AD6R 28.2
GTEX-ZZ64-1226-SM-5E43R 28.0
GTEX-XV7Q-2326-SM-4BRVZ 27.5
GTEX-XMK1-1126-SM-4IHJ8 27.2
GTEX-U8XE-0826-SM-4E3J1 26.9
GTEX-X4XY-0926-SM-4E3JD 25.9
GTEX-TKQ1-0226-SM-33HB5 25.4
GTEX-144GM-0926-SM-5O994 25.3
GTEX-XGQ4-0926-SM-4AT4U 25.0
GTEX-14E6E-1326-SM-5S2NR 24.8
GTEX-T5JW-2026-SM-4DM63 24.8
GTEX-XYKS-1326-SM-4BRUN 24.8
GTEX-ZV6S-1826-SM-5NQ8D 24.4
GTEX-R53T-1526-SM-48FEK 24.1
GTEX-Y114-2026-SM-4TT7L 23.1
GTEX-QMRM-1626-SM-4R1KV 22.9
GTEX-1211K-1926-SM-5EQLB 21.8
GTEX-11EQ9-1826-SM-5Q5AJ 21.7
GTEX-146FH-0826-SM-5SI8T 21.1
GTEX-YEC3-1026-SM-5IFI5 21.1
GTEX-ZYWO-2326-SM-5GZY4 20.9
GTEX-Y5V6-2126-SM-4WWFX 19.2
GTEX-12KS4-0126-SM-5Q5A5 19.1
GTEX-R55D-0826-SM-48FEA 19.1
GTEX-ZAB4-2526-SM-5HL8M 19.0
GTEX-11ZUS-0826-SM-5FQUY 18.8
GTEX-XQ3S-1326-SM-4BOPQ 18.7
GTEX-RUSQ-2026-SM-4GIAK 18.6
GTEX-133LE-1726-SM-5K7VQ 18.3
GTEX-11NSD-0926-SM-5N9DR 17.8
GTEX-T6MO-0326-SM-32QOK 17.7
GTEX-13W3W-1226-SM-5LU4H 17.6
GTEX-PSDG-1626-SM-48TCQ 17.6
GTEX-11LCK-2426-SM-5HL5F 16.7
GTEX-12WSN-1326-SM-5GCNT 16.5
GTEX-Y5V5-2126-SM-4WWFO 16.5
GTEX-UTHO-1026-SM-3GAF7 15.8
GTEX-12BJ1-1826-SM-5HL9N 15.4
GTEX-145ME-1526-SM-5Q5F2 15.3
GTEX-11ONC-2126-SM-5HL6E 15.1
GTEX-WFON-1826-SM-3GILG 15.1
GTEX-13O61-1826-SM-5KM4I 14.4
GTEX-YFCO-1826-SM-4W1YH 14.3
GTEX-ZDTT-2126-SM-5S2OJ 14.0
GTEX-11TT1-2126-SM-5GU5Y 13.8
GTEX-ZLV1-1426-SM-4WWES 13.6
GTEX-S4UY-0726-SM-4AD6X 13.2
GTEX-ZA64-1526-SM-5CVMD 12.7
GTEX-13113-1726-SM-5GCOO 12.3
GTEX-QEL4-2126-SM-447AE 12.2
GTEX-1399U-1826-SM-5PNZ1 12.1
GTEX-145MN-1926-SM-5SIAI 12.1
GTEX-YJ8O-2226-SM-5IFHW 11.6
GTEX-XUW1-2326-SM-4BOO5 11.5
GTEX-144GL-2026-SM-5LU3O 10.9
GTEX-1122O-1226-SM-5H113 10.5
GTEX-132NY-0826-SM-5K7Y7 10.4
GTEX-11P81-1926-SM-5BC53 10.1
GTEX-14AS3-1626-SM-5S2OY 9.9
GTEX-11DXZ-1926-SM-5GZZL 9.6
GTEX-13N1W-0626-SM-5MR4U 9.6
GTEX-13PVQ-1026-SM-5KM3M 9.4
GTEX-WXYG-2226-SM-4E3IM 9.0
GTEX-12WSM-1726-SM-5BC6J 8.7
GTEX-ZLFU-2126-SM-4WWEV 8.5
GTEX-U3ZN-1926-SM-4DXSG 8.3
GTEX-11O72-2126-SM-5N9FO 8.2
GTEX-Y3I4-1526-SM-4TT7K 8.2
GTEX-ZYFC-0826-SM-5E44K 8.2
GTEX-ZQUD-1926-SM-51MSA 8.1
GTEX-WRHU-0326-SM-3MJFY 7.8
GTEX-145MO-0826-SM-5NQBL 7.7
GTEX-ZUA1-1526-SM-59HLS 7.1
GTEX-139TU-0626-SM-5KM3X 6.9
GTEX-Y9LG-1426-SM-5IFJZ 6.9
GTEX-TKQ2-1826-SM-33HB2 6.8
GTEX-Y8LW-1626-SM-5IFHX 6.7
GTEX-ZYT6-0126-SM-5E45J 6.7
GTEX-U412-1826-SM-4DXTJ 6.6
GTEX-ZVT4-1026-SM-57WC4 6.5
GTEX-1313W-0826-SM-5EQ4T 6.3
GTEX-13OW8-0226-SM-5K7UP 6.3
GTEX-Y3IK-2326-SM-4WWDT 6.2
GTEX-11DZ1-0326-SM-5N9BN 6.0
GTEX-TML8-1226-SM-32QON 6.0
GTEX-ZZPU-0626-SM-5E43T 6.0
GTEX-X15G-1626-SM-3NMB3 5.9
GTEX-Y5LM-1726-SM-4VDSX 4.9
GTEX-ZV7C-1826-SM-5NQ83 4.9
GTEX-117XS-1926-SM-5GICO 4.4
GTEX-ZTTD-1026-SM-51MRD 4.3
GTEX-11GSO-1926-SM-5A5K3 4.1
GTEX-S7SE-0826-SM-4AT4D 4.1
GTEX-UJHI-1426-SM-3DB9C 4.1
GTEX-13D11-1026-SM-5IJFB 3.9
GTEX-13N11-1726-SM-5J1OJ 3.7
GTEX-147F4-2826-SM-5NQBN 3.6
GTEX-QVJO-1826-SM-447C9 3.1
GTEX-RWS6-1926-SM-47JXY 3.1
GTEX-11OF3-1926-SM-59889 3.0
GTEX-WI4N-1426-SM-3LK7H 3.0
GTEX-11WQK-2426-SM-5GU5C 2.9
GTEX-1192X-2326-SM-5987X 2.6
GTEX-TMMY-0726-SM-33HBE 2.5
GTEX-XBED-1626-SM-47JYN 2.5
GTEX-ZVZQ-0826-SM-51MRF 2.5
GTEX-XUJ4-1926-SM-4BOOV 2.4
GTEX-1117F-2826-SM-5GZXL 2.3
GTEX-11DXY-2326-SM-5GICW 2.3
GTEX-11DXW-0626-SM-5N9ER 2.2
GTEX-1269C-2426-SM-5FQSN 2.2
GTEX-13CF2-2026-SM-5K7VI 2.2
GTEX-X261-0626-SM-3NMD9 2.2
GTEX-11EMC-2026-SM-5A5JV 2.1
GTEX-ZVTK-0326-SM-51MRR 2.1
GTEX-ZVT2-1826-SM-5NQ8W 2.0
GTEX-ZF3C-2326-SM-5S2MZ 1.9
GTEX-UPK5-2326-SM-3P5Z8 1.8
GTEX-ZY6K-1626-SM-5GZWV 1.8
GTEX-ZYW4-0826-SM-5GIDG 1.4
GTEX-111YS-1926-SM-5GICC 1.3
GTEX-12WSK-2226-SM-5GCO5 1.2
GTEX-ZWKS-2826-SM-5NQ74 1.2
GTEX-12ZZX-1126-SM-5EGKB 1.1
GTEX-13O3Q-2226-SM-5KM4O 1.1
GTEX-14753-2426-SM-5LU8U 1.1
GTEX-S4P3-1326-SM-4AD6V 1.1
GTEX-ZXES-0826-SM-5E43C 1.1
GTEX-11NV4-2026-SM-5N9DG 1.0
GTEX-1314G-1226-SM-5BC6D 1.0
GTEX-Q2AG-0326-SM-48U1O 1.0
GTEX-Y111-2026-SM-4SOJA 0.9
GTEX-11EI6-0626-SM-5985T 0.8
GTEX-13QIC-2326-SM-5LU5N 0.8
GTEX-WOFL-0826-SM-3MJG1 0.8
GTEX-ZF29-1926-SM-5S2P1 0.8
GTEX-11EM3-1326-SM-5N9C6 0.7
GTEX-14ABY-2126-SM-5QGQZ 0.7
GTEX-11GS4-2126-SM-5A5KR 0.6
GTEX-12WSB-0626-SM-59HJO 0.6
GTEX-XMD1-0826-SM-4AT52 0.6
GTEX-ZVE2-1226-SM-5NQ8R 0.6
GTEX-145LT-0726-SM-5S2VM 0.5
GTEX-QEG5-0726-SM-4R1JQ 0.5
GTEX-T2YK-2226-SM-32QPT 0.5
GTEX-XMD2-0926-SM-4WWEF 0.5
GTEX-132Q8-1426-SM-5EGK7 0.4
GTEX-13W46-0826-SM-5LU3H 0.4
GTEX-T6MN-0726-SM-32PML 0.4
GTEX-S341-1526-SM-4AD6K 0.3
GTEX-SIU7-1626-SM-4BRUK 0.3
GTEX-VUSG-2226-SM-4KKZO 0.3
GTEX-X4EP-2926-SM-3P5YQ 0.3
GTEX-13O3O-0826-SM-5K7WE 0.2
GTEX-QDT8-0626-SM-48TYW 0.2
GTEX-R3RS-0626-SM-48FE1 0.2
GTEX-T2IS-1526-SM-32QPR 0.2
GTEX-T5JC-2126-SM-32PMO 0.2
GTEX-ZEX8-2226-SM-57WC6 0.2
GTEX-ZF2S-2026-SM-5E461 0.2
GTEX-11P7K-0726-SM-5EGKX 0.1
GTEX-11PRG-0826-SM-5EQ6A 0.1
GTEX-139T8-0826-SM-5L3DE 0.1
GTEX-13OW5-2226-SM-5L3HC 0.1
GTEX-RU72-0626-SM-46MUI 0.1
GTEX-U3ZH-1426-SM-4DXSR 0.1
GTEX-XOT4-0726-SM-4GIAW 0.1
GTEX-XUZC-1626-SM-4BRVP 0.1
GTEX-ZAJG-0626-SM-5HL8X 0.1
GTEX-ZC5H-2626-SM-5J2MG 0.1
GTEX-11WQC-1726-SM-5GU4W 0.0
GTEX-131XW-0726-SM-5EGK3 0.0
GTEX-131YS-0626-SM-5EGKL 0.0
GTEX-13FHO-0826-SM-5L3E8 0.0
GTEX-13FTY-2226-SM-5J1ND 0.0
GTEX-13NZ8-0126-SM-5IJCT 0.0
GTEX-13NZ9-1026-SM-5MR5K 0.0
GTEX-13NZB-2126-SM-5MR4Y 0.0
GTEX-13O3P-0826-SM-5L3DH 0.0
GTEX-13PL6-2926-SM-5L3I2 0.0
GTEX-R55F-1726-SM-2TF4R 0.0
GTEX-VJWN-0726-SM-3GIJ8 0.0
GTEX-W5X1-2326-SM-3GIL6 0.0
GTEX-WYBS-0926-SM-3NM94 0.0
GTEX-WYJK-1326-SM-3NB2T 0.0
GTEX-WYVS-1726-SM-3NMAY 0.0
GTEX-YFC4-1426-SM-5IFJG 0.0
GTEX-ZTX8-1226-SM-4YCE9 0.0
GTEX-ZU9S-1926-SM-5NQBP 0.0
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

89.6

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 89.6
FF:10080-102A8 77 years, female 89.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.