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TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:14.5TPM
GTEx:10.2RPKM
FANTOM5:20.2Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA003387

 

Antibody CAB003799

 

Squamous epithelial cells

Not detected   Medium  
   

ESOPHAGUS - HPA RNA-seq

Average TPM

14.5

overview Female, age 70
Sample 1
TPM: 14.8
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 14.0
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 14.7
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

10.2

GTEx sample id

RPKM

6.59.012.61.221.20510152025303540
 
6.59.012.61.221.20510152025303540

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 10.2
Samples: 286

Max RPKM: 43.5
Min RPKM: 1.2
Std RPKM: 5.7
Median RPKM: 9
GTEX-133LE-0626-SM-5IFFJ 43.5
GTEX-RU72-0726-SM-46MUW 36.9
GTEX-TMMY-1126-SM-4DXSX 32.4
GTEX-Y111-1626-SM-57WCY 27.2
GTEX-144GO-2726-SM-5O9A2 26.6
GTEX-146FQ-1026-SM-5LU8I 26.6
GTEX-Y8E4-1726-SM-5LU9G 26.4
GTEX-ZTX8-0226-SM-5E44D 25.7
GTEX-RUSQ-0826-SM-47JWW 25.5
GTEX-WFJO-0826-SM-4LVM5 24.3
GTEX-Y5V6-1026-SM-4VBS2 22.9
GTEX-12WSL-1526-SM-5GCP8 22.7
GTEX-XGQ4-1526-SM-4AT6H 22.4
GTEX-11EMC-2226-SM-5A5JW 22.1
GTEX-11LCK-1726-SM-5S2OQ 21.7
GTEX-146FH-1726-SM-5QGQ2 21.2
GTEX-111YS-0926-SM-5EGGI 20.9
GTEX-131XF-0826-SM-5GICG 20.4
GTEX-13CF3-1626-SM-5IFG9 20.0
GTEX-13X6H-1326-SM-5LU42 19.7
GTEX-11DXX-1126-SM-5GZZK 18.6
GTEX-144GN-0626-SM-5O9B2 18.1
GTEX-ZT9X-0526-SM-5GCOP 18.1
GTEX-13PVQ-1726-SM-5IFF3 18.0
GTEX-YFC4-1226-SM-5LU9R 17.9
GTEX-14E6E-0726-SM-5S2R3 17.8
GTEX-RU1J-0326-SM-46MUM 17.7
GTEX-XMK1-1326-SM-4B65Q 17.5
GTEX-144FL-2726-SM-5O98Z 17.4
GTEX-T5JW-1326-SM-4DM5G 17.4
GTEX-139UW-1126-SM-5IJEJ 16.7
GTEX-Y8LW-0726-SM-5IFI1 16.4
GTEX-11TT1-0526-SM-5P9JO 16.2
GTEX-P78B-1026-SM-3NMC4 16.2
GTEX-ZYWO-1026-SM-5E45U 16.2
GTEX-V955-1126-SM-4JBH3 16.1
GTEX-1497J-2726-SM-5SI9W 16.0
GTEX-R55E-1326-SM-48FCR 15.6
GTEX-ZYY3-1526-SM-5SIA9 15.6
GTEX-ZYT6-1126-SM-5GZYR 15.5
GTEX-QEG5-1426-SM-447AS 15.4
GTEX-S7SF-0926-SM-4AD4M 15.1
GTEX-1399U-1026-SM-5J1OC 14.7
GTEX-11EM3-0826-SM-5N9CC 14.4
GTEX-RM2N-0726-SM-48FD5 14.3
GTEX-TSE9-1226-SM-4DXTM 14.2
GTEX-U3ZM-0526-SM-4DXTB 14.2
GTEX-S32W-0926-SM-4AD5X 14.1
GTEX-ZUA1-1226-SM-5NQ6O 14.1
GTEX-RNOR-1226-SM-48FDQ 14.0
GTEX-WQUQ-1626-SM-4OOSH 13.8
GTEX-Y5LM-1026-SM-4VDSQ 13.8
GTEX-13X6K-2126-SM-5O9D4 13.7
GTEX-QEL4-1426-SM-447AC 13.7
GTEX-NPJ8-1926-SM-3MJGB 13.6
GTEX-T2IS-0826-SM-4DM6L 13.6
GTEX-145MF-1426-SM-5O9B6 13.5
GTEX-12ZZW-1726-SM-5DUVD 13.4
GTEX-13O21-0626-SM-5IJDI 13.3
GTEX-U3ZH-1026-SM-4DXUZ 13.3
GTEX-PSDG-1326-SM-48TD2 13.2
GTEX-WFG7-1126-SM-4LMK3 13.2
GTEX-11DYG-1326-SM-5N9DO 13.1
GTEX-11DZ1-2026-SM-5A5KG 13.0
GTEX-UPK5-1226-SM-4IHL8 13.0
GTEX-ZDYS-0826-SM-4WWCR 13.0
GTEX-P4QS-0626-SM-3NMD1 12.9
GTEX-Y3I4-1226-SM-4TT8N 12.8
GTEX-13FH7-0526-SM-5IJF8 12.7
GTEX-QLQ7-0926-SM-447BC 12.7
GTEX-WFG8-1226-SM-4V6EI 12.7
GTEX-1212Z-2126-SM-5FQTM 12.6
GTEX-WK11-1026-SM-4OOS8 12.5
GTEX-ZF3C-1626-SM-4WWB4 12.5
GTEX-11NSD-1126-SM-5N9BQ 12.4
GTEX-145MO-1426-SM-5Q5BS 12.4
GTEX-TKQ1-0326-SM-4DXSM 12.4
GTEX-WOFM-0626-SM-4OOS3 12.3
GTEX-X15G-0826-SM-4PQZD 12.3
GTEX-XXEK-0326-SM-4BRVV 12.3
GTEX-13111-0826-SM-5LZV3 12.2
GTEX-X4EO-1226-SM-4QARR 12.2
GTEX-ZGAY-1126-SM-4WWBS 12.2
GTEX-14BMU-0926-SM-5S2QB 11.9
GTEX-R55D-1126-SM-48FEB 11.9
GTEX-YEC3-2526-SM-4YCDN 11.9
GTEX-139T6-0626-SM-5IFF9 11.8
GTEX-XLM4-2326-SM-4TT2D 11.8
GTEX-13U4I-1126-SM-5LU3S 11.4
GTEX-QEG4-0726-SM-4R1JL 11.3
GTEX-Y3IK-1126-SM-51MSV 11.3
GTEX-11ONC-1526-SM-5GU6S 11.2
GTEX-11P81-0826-SM-5P9GR 11.2
GTEX-ZZ64-0226-SM-5E44X 11.2
GTEX-11I78-1526-SM-5A5K7 11.1
GTEX-Q2AI-0626-SM-48TZU 11.1
GTEX-QV44-1126-SM-4R1KO 11.1
GTEX-111CU-0726-SM-5GZYD 10.9
GTEX-13OVG-0626-SM-5IFEP 10.9
GTEX-Z9EW-0526-SM-5HL8S 10.7
GTEX-SNMC-0526-SM-4DM69 10.6
GTEX-146FR-0426-SM-5SI97 10.5
GTEX-R45C-1226-SM-48FEE 10.5
GTEX-W5WG-1626-SM-4LMKG 10.5
GTEX-13O1R-1326-SM-5IJF5 10.4
GTEX-13OVJ-1226-SM-5L3HA 10.4
GTEX-QESD-0826-SM-47J4G 10.4
GTEX-S3XE-0926-SM-4AD4S 10.4
GTEX-SNOS-0626-SM-4DM5F 10.3
GTEX-T5JC-1726-SM-4DM6U 10.2
GTEX-UPIC-1026-SM-4IHLT 10.2
GTEX-OIZI-1426-SM-3NB1T 10.1
GTEX-XYKS-1526-SM-4BRUP 10.1
GTEX-Y5V5-1626-SM-4VDSG 10.1
GTEX-13O3Q-0826-SM-5IFGF 10.0
GTEX-PWN1-0626-SM-48TDT 10.0
GTEX-X3Y1-1326-SM-4PQZB 10.0
GTEX-ZPU1-1426-SM-4WWFU 10.0
GTEX-1211K-0926-SM-5FQTL 9.9
GTEX-12696-1326-SM-5FQTJ 9.9
GTEX-PVOW-1626-SM-48TC9 9.9
GTEX-S33H-0826-SM-4AD5Y 9.9
GTEX-12ZZX-1326-SM-5DUWI 9.8
GTEX-ZAB4-1126-SM-5HL86 9.8
GTEX-11NUK-1326-SM-5P9GN 9.7
GTEX-13RTK-0526-SM-5S2QF 9.7
GTEX-145LS-1826-SM-5LUAZ 9.7
GTEX-OXRL-0626-SM-3NM9C 9.7
GTEX-P4PQ-0626-SM-3NMCU 9.7
GTEX-X4LF-0626-SM-4QASB 9.7
GTEX-13W3W-1626-SM-5LU35 9.5
GTEX-ZA64-0626-SM-5HL9O 9.5
GTEX-13D11-1926-SM-5IFGB 9.4
GTEX-Y114-0926-SM-4TT7J 9.4
GTEX-S4P3-0426-SM-4AD56 9.3
GTEX-ZAB5-0926-SM-5CVMV 9.3
GTEX-ZVE2-1326-SM-5NQ94 9.3
GTEX-132QS-1426-SM-5P9GE 9.2
GTEX-V1D1-1026-SM-4JBHE 9.1
GTEX-WVLH-1426-SM-4MVNX 9.1
GTEX-ZT9W-1326-SM-51MTB 9.1
GTEX-11DXY-1426-SM-5N9CN 9.0
GTEX-145LT-1126-SM-5LUA1 9.0
GTEX-RTLS-1126-SM-46MUQ 9.0
GTEX-11GSP-1826-SM-5N9DQ 8.9
GTEX-13NZB-1226-SM-5J2MW 8.9
GTEX-13S86-0826-SM-5SI6J 8.9
GTEX-13FTW-1626-SM-5KM4N 8.8
GTEX-QLQW-0526-SM-4R1KS 8.8
GTEX-ZYVF-2226-SM-5GIDD 8.8
GTEX-11P82-0526-SM-5986P 8.7
GTEX-139TU-1226-SM-5J2NL 8.7
GTEX-ZE9C-1126-SM-4WWBD 8.7
GTEX-ZXES-1126-SM-5GZXN 8.6
GTEX-ZYW4-1326-SM-5E45N 8.6
GTEX-N7MT-0326-SM-48TDP 8.5
GTEX-OIZH-0626-SM-3NB1L 8.5
GTEX-QVUS-0626-SM-447CC 8.4
GTEX-R55G-1026-SM-48FDI 8.4
GTEX-139YR-1726-SM-5IFFK 8.3
GTEX-144GM-1426-SM-5LU31 8.3
GTEX-14BIN-2726-SM-5RQIE 8.3
GTEX-OOBK-0625-SM-3LK5P 8.3
GTEX-UJHI-0826-SM-4IHLM 8.2
GTEX-11TUW-1326-SM-5EQKV 8.1
GTEX-12WSA-1426-SM-5EGJU 8.1
GTEX-145ME-0526-SM-5QGQV 8.1
GTEX-12KS4-0926-SM-5BC5S 8.0
GTEX-13G51-0926-SM-5IFFU 8.0
GTEX-Q2AH-0826-SM-48TZN 8.0
GTEX-S341-0526-SM-4AD5U 8.0
GTEX-U3ZN-1726-SM-4DXUQ 8.0
GTEX-T6MO-0526-SM-4DM6R 7.9
GTEX-UJMC-0926-SM-4IHLK 7.9
GTEX-131XG-1026-SM-5GCMX 7.8
GTEX-13W46-1926-SM-5J2MF 7.8
GTEX-ZG7Y-1126-SM-4WWEZ 7.8
GTEX-11ZTS-2626-SM-5EGIC 7.7
GTEX-14E1K-1226-SM-5S2PD 7.6
GTEX-QCQG-0626-SM-48U21 7.6
GTEX-YF7O-0926-SM-5IFIF 7.6
GTEX-ZY6K-0626-SM-59HJL 7.6
GTEX-132Q8-1826-SM-5EGIY 7.5
GTEX-13FTX-0526-SM-5IFGS 7.5
GTEX-XUZC-0426-SM-4BOPE 7.5
GTEX-U4B1-0826-SM-4DXTW 7.4
GTEX-YECK-1626-SM-5IFHQ 7.4
GTEX-131YS-1426-SM-5IJF7 7.3
GTEX-13OW8-2326-SM-5L3I9 7.3
GTEX-XBED-1026-SM-48TCB 7.3
GTEX-ZTPG-1626-SM-5DUX2 7.3
GTEX-PLZ5-0926-SM-3TW8L 7.2
GTEX-VUSG-1226-SM-4KKZF 7.2
GTEX-SUCS-0726-SM-4DM7J 7.1
GTEX-WEY5-0926-SM-4LMI4 7.1
GTEX-ZQUD-0426-SM-57WFR 7.1
GTEX-13FHO-1726-SM-5IFGM 7.0
GTEX-14DAQ-1426-SM-5RQJD 7.0
GTEX-XV7Q-1126-SM-4BRVS 7.0
GTEX-ZYFG-1126-SM-5GICY 7.0
GTEX-12C56-1226-SM-5FQSU 6.9
GTEX-WRHK-0526-SM-4MVOF 6.9
GTEX-11XUK-0826-SM-5GU6P 6.8
GTEX-13PVR-1826-SM-5Q5CC 6.8
GTEX-OXRP-0926-SM-48TC1 6.8
GTEX-RWS6-0826-SM-47JXF 6.8
GTEX-ZVP2-1326-SM-57WCE 6.8
GTEX-11VI4-0526-SM-5EQ48 6.7
GTEX-R3RS-1326-SM-48FE7 6.7
GTEX-XMD2-1326-SM-4YCET 6.7
GTEX-XQ3S-1126-SM-4BOPK 6.7
GTEX-147F3-0826-SM-5NQA7 6.5
GTEX-14ICL-0526-SM-5RQJ6 6.5
GTEX-WFON-0826-SM-4LVMI 6.5
GTEX-WH7G-0926-SM-4LVMJ 6.5
GTEX-U8XE-1726-SM-4E3IF 6.4
GTEX-XK95-1026-SM-4GIDV 6.4
GTEX-11EQ9-0726-SM-5A5K2 6.3
GTEX-14AS3-0626-SM-5QGQD 6.3
GTEX-NFK9-1126-SM-3LK78 6.3
GTEX-11ZU8-1526-SM-5EGHX 6.2
GTEX-S95S-0426-SM-4B64I 6.2
GTEX-T8EM-0526-SM-4DM64 6.2
GTEX-XOTO-2126-SM-4B64U 6.2
GTEX-OXRK-1326-SM-3NB1A 6.1
GTEX-1399S-1326-SM-5P9GH 6.0
GTEX-145LV-1326-SM-5S2QI 6.0
GTEX-ZC5H-1326-SM-5HL7E 6.0
GTEX-13FLV-1126-SM-5J2NO 5.9
GTEX-145MN-1026-SM-5NQ9G 5.9
GTEX-ZVT2-1326-SM-5E45H 5.9
GTEX-12WSD-1826-SM-5GCOA 5.8
GTEX-12ZZY-1426-SM-5N9EI 5.8
GTEX-13QBU-1026-SM-5LU3R 5.8
GTEX-XUJ4-1026-SM-4BOPB 5.8
GTEX-ZF2S-1226-SM-4WWAX 5.8
GTEX-YJ89-1526-SM-5P9IR 5.7
GTEX-11DXZ-1226-SM-5H11L 5.5
GTEX-R53T-1126-SM-48FD4 5.4
GTEX-RN64-1026-SM-48FDX 5.4
GTEX-VJYA-0726-SM-4KL1T 5.4
GTEX-131XE-1426-SM-5HL7V 5.3
GTEX-PWCY-0726-SM-48TCS 5.3
GTEX-1122O-1726-SM-5GICM 5.2
GTEX-REY6-1326-SM-48FDO 5.2
GTEX-12WSK-1126-SM-5LZV8 5.1
GTEX-PLZ6-0526-SM-3P61C 5.1
GTEX-O5YV-1026-SM-3LK72 5.0
GTEX-PLZ4-1626-SM-3P618 5.0
GTEX-YB5E-0926-SM-4WWDQ 5.0
GTEX-14C38-2126-SM-5RQJO 4.8
GTEX-QDVN-1026-SM-48TZA 4.8
GTEX-R55C-0826-SM-48FCL 4.8
GTEX-SE5C-1226-SM-4BRWV 4.8
GTEX-XBEW-1326-SM-4AT63 4.8
GTEX-117YX-1626-SM-5GZZG 4.7
GTEX-ZF29-1326-SM-4WWB6 4.7
GTEX-ZPCL-1426-SM-57WEC 4.7
GTEX-RVPV-0526-SM-47JYL 4.6
GTEX-1399Q-1126-SM-5P9JA 4.5
GTEX-13OVI-2626-SM-5KM4T 4.5
GTEX-OXRN-1726-SM-3NM9B 4.5
GTEX-QDVJ-0726-SM-48U1W 4.5
GTEX-XQ8I-1526-SM-4BOOH 4.5
GTEX-Y9LG-0626-SM-4WWDH 4.3
GTEX-1399R-0826-SM-5IJEL 4.2
GTEX-148VJ-1026-SM-5LU98 4.1
GTEX-OIZG-1026-SM-3LK5X 4.1
GTEX-14H4A-1626-SM-5SI69 3.9
GTEX-13QJ3-1726-SM-5RQK9 3.8
GTEX-P4PP-0626-SM-3NM9X 3.8
GTEX-11P7K-1326-SM-5BC5G 3.7
GTEX-P4QT-0626-SM-3NMCP 3.5
GTEX-TML8-1526-SM-4DXUX 3.2
GTEX-117YW-1926-SM-5H121 3.1
GTEX-12BJ1-1626-SM-5HL8Y 2.7
GTEX-13X6I-1026-SM-5LU4C 2.7
GTEX-X62O-2226-SM-46MW3 2.7
GTEX-ZZPT-1426-SM-5N9C5 2.7
GTEX-X4XY-1726-SM-46MVO 2.4
GTEX-ZLV1-0526-SM-4WWD4 2.4
GTEX-ZTSS-0626-SM-59867 2.3
GTEX-X585-1226-SM-46MW7 2.1
GTEX-132AR-2226-SM-5J2NT 1.9
GTEX-14A6H-1326-SM-5NQBC 1.4
GTEX-S4Q7-0626-SM-4AD5M 1.2
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

20.2

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 20.2
FF:10015-101C6 68,74,75 years, mixed 20.2

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