Tissue expression of NPAS2 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	5.2	TPM
GTEx:	4.8	RPKM
FANTOM5:	17.8	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Fibroblasts:	Medium
Peripheral nerve:	Low

Antibody staining	Antibody HPA019674
Adipocytes	Medium
Fibroblasts	Medium
Peripheral nerve	Low

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Chondrocytes:	Medium
Fibroblasts:	Medium

Antibody staining	Antibody HPA019674
Adipocytes	High
Chondrocytes	High
Fibroblasts	Medium

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	5.2

Female, age 80

Sample 1
TPM: 1.6

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 2.6

Female, age 57

Sample 3
TPM: 0.8

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 14.6

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 6.3

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	4.8

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 4.5

Samples: 350

Max RPKM: 18.4
Min RPKM: 0.9
Std RPKM: 2
Median RPKM: 4.1

GTEX-ZYVF-0226-SM-5GIEG

18.4

GTEX-OXRO-0226-SM-3LK6F

14.2

GTEX-XYKS-2726-SM-4E3IC

12.3

GTEX-QDVJ-1826-SM-2S1P3

11.4

GTEX-S3XE-1626-SM-3K2AJ

10.1

GTEX-13NYS-0226-SM-5MR49

9.4

GTEX-POYW-0726-SM-2XCEO

9.4

GTEX-R55D-0326-SM-48FES

9.4

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 5.3

Samples: 227

Max RPKM: 25.1
Min RPKM: 0.6
Std RPKM: 3.2
Median RPKM: 4.4

GTEX-1339X-0726-SM-5L3FF

25.1

GTEX-U8XE-1926-SM-3DB98

16.9

GTEX-ZYW4-2226-SM-5GZYG

13.9

GTEX-13OVH-1126-SM-5K7YP

13.3

GTEX-133LE-0926-SM-5P9J1

13.2

GTEX-ZAJG-1626-SM-5HL7I

13.1

GTEX-13O3P-0926-SM-5IFFI

12.4

GTEX-11WQK-1526-SM-5EGKN

12.1

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	17.8

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 17.8

FF:10010-101C1

65,65,76 years, mixed

17.8