Tissue expression of NPAS2 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	27.5	TPM
GTEx:	23.2	RPKM
FANTOM5:	70.5	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Medium

Antibody staining	Antibody HPA019674
Squamous epithelial cells	Medium

ESOPHAGUS - HPA RNA-seq

Average TPM	27.5

Female, age 70

Sample 1
TPM: 24.5

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 22.1

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 36.0

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	23.2

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 23.2

Samples: 286

Max RPKM: 63.8
Min RPKM: 6.8
Std RPKM: 7.9
Median RPKM: 22.7

GTEX-OXRP-0926-SM-48TC1

63.8

GTEX-148VJ-1026-SM-5LU98

45.3

GTEX-X4XY-1726-SM-46MVO

43.3

GTEX-Q2AH-0826-SM-48TZN

42.0

GTEX-PWN1-0626-SM-48TDT

41.4

GTEX-14A6H-1326-SM-5NQBC

41.1

GTEX-ZE9C-1126-SM-4WWBD

40.8

GTEX-QEG4-0726-SM-4R1JL

40.1

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	70.5

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 70.5

FF:10015-101C6

68,74,75 years, mixed

70.5