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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:33.8RPKM
FANTOM5:102.8Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody CAB020795

 

Glial cells

Medium  

Neuronal cells

Medium  
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

33.8

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 33.8
Samples: 117

Max RPKM: 111.3
Min RPKM: 10.1
Std RPKM: 14.8
Median RPKM: 31.4
GTEX-WHSE-0011-R5A-SM-3P5ZO 111.3
GTEX-13OW5-0011-R5b-SM-5L3FR 88.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 72.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 66.0
GTEX-13OW6-0011-R5a-SM-5O9BK 63.6
GTEX-13JUV-0011-R5a-SM-5LZY5 63.2
GTEX-11GSP-0011-R5a-SM-57WBE 58.1
GTEX-WWYW-0011-R5A-SM-3NB3E 56.3
GTEX-NL4W-0011-R5a-SM-2I3GD 54.2
GTEX-OHPN-0011-R5A-SM-2I5FF 54.2
GTEX-13NYS-0011-R5a-SM-5MR4D 53.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 51.2
GTEX-1445S-0011-R5a-SM-5PNUS 47.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 47.0
GTEX-OXRN-0011-R5A-SM-2I5EF 46.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 46.5
GTEX-132Q8-0011-R5a-SM-5IJDM 46.5
GTEX-N7MT-0011-R5a-SM-2I3G6 45.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 44.7
GTEX-139TS-0011-R5b-SM-5J2MZ 44.2
GTEX-13OW7-0011-R5b-SM-5O9DM 43.4
GTEX-XMD1-0011-R5A-SM-4AT47 43.4
GTEX-13FLV-0011-R5a-SM-5LZWT 43.3
GTEX-13OVH-0011-R5b-SM-5KM4L 42.5
GTEX-YFC4-0011-R5a-SM-4RGLR 42.1
GTEX-13JVG-0011-R5a-SM-5MR4O 41.9
GTEX-13X6I-0011-R5a-SM-5PNWW 41.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 41.3
GTEX-RU72-0011-R5A-SM-2TF6U 40.9
GTEX-144GO-0011-R5a-SM-5PNUR 40.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 40.4
GTEX-12ZZX-0011-R5a-SM-5HL89 37.9
GTEX-12WSF-0011-R5a-SM-5HL8K 37.7
GTEX-13CZV-0011-R5a-SM-5K7XA 37.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 37.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 37.1
GTEX-13OVL-0011-R5b-SM-5L3FU 37.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 36.1
GTEX-S7SE-0011-R5A-SM-2XCDA 35.8
GTEX-ZV68-0011-R5a-SM-4YCDW 35.8
GTEX-12WSB-0011-R5b-SM-5GU67 35.6
GTEX-131YS-0011-R5b-SM-5K7YB 35.5
GTEX-144GL-0011-R5b-SM-5PNUJ 35.3
GTEX-T5JC-0011-R5A-SM-32PLK 35.3
GTEX-13CIG-0011-R5b-SM-5L3F2 35.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 35.1
GTEX-RVPV-0011-R5A-SM-2TF69 34.9
GTEX-145LS-0011-R5a-SM-5SI65 34.5
GTEX-13G51-0011-R5a-SM-5L3EB 34.3
GTEX-13SLX-0011-R5a-SM-5O9BV 33.7
GTEX-T6MN-0011-R5A-SM-32QPD 33.7
GTEX-X4XX-0011-R5A-SM-46MWN 33.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 33.1
GTEX-13VXU-0011-R5a-SM-5O9D7 32.6
GTEX-13112-0011-R5b-SM-5DUV8 32.5
GTEX-WZTO-0011-R5B-SM-3NMC5 32.4
GTEX-WVLH-0011-R5A-SM-3MJFW 32.3
GTEX-13O3O-0011-R5b-SM-5KM44 32.1
GTEX-13FLW-0011-R5a-SM-5LZX6 31.4
GTEX-ZVT3-0011-R5a-SM-51MSI 31.0
GTEX-1399T-0011-R5b-SM-5IJDK 30.9
GTEX-X585-0011-R5A-SM-46MVI 30.8
GTEX-ZE7O-0011-R5a-SM-57WBO 30.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 30.3
GTEX-X261-0011-R5A-SM-3NMB4 30.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 29.9
GTEX-QVJO-0011-R5A-SM-2S1QM 29.8
GTEX-13CF2-0011-R5a-SM-5LZWS 28.6
GTEX-13X6J-0011-R5b-SM-5PNWT 27.8
GTEX-13NYB-0011-R5a-SM-5MR45 27.2
GTEX-11OF3-0011-R5a-SM-57WB4 27.1
GTEX-YJ89-0011-R5a-SM-4V6GM 27.1
GTEX-13X6K-0011-R5b-SM-5PNUE 26.9
GTEX-R55E-0011-R5A-SM-2TC5N 26.9
GTEX-13FXS-0011-R5b-SM-5LZYE 26.7
GTEX-14BIN-0011-R5b-SM-5SI78 25.8
GTEX-NPJ7-0011-R5a-SM-33HBK 25.6
GTEX-N7MS-0011-R5a-SM-2HMK8 25.4
GTEX-ZXG5-0011-R5b-SM-57WBN 25.4
GTEX-12WSD-0011-R5b-SM-5CVNG 25.0
GTEX-UTHO-0011-R5A-SM-3GIJD 24.6
GTEX-ZUA1-0011-R5b-SM-51MTG 24.5
GTEX-11H98-0011-R5b-SM-57WCF 24.4
GTEX-PVOW-0011-R5A-SM-32PL7 24.4
GTEX-RVPU-0011-R5A-SM-2XCAD 24.3
GTEX-11UD1-0011-R5b-SM-5P9FP 23.8
GTEX-14ABY-0011-R5b-SM-5SI7B 23.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 23.6
GTEX-11WQC-0011-R5a-SM-5BC74 23.5
GTEX-14BIM-0011-R5b-SM-5S2RM 23.5
GTEX-13S7M-0011-R5b-SM-5P9HS 23.3
GTEX-XOTO-0011-R5A-SM-4B657 23.1
GTEX-145MH-0011-R5a-SM-5P9JT 23.0
GTEX-TSE9-0011-R5A-SM-3DB7J 22.8
GTEX-12WSC-0011-R5b-SM-5CVNS 22.7
GTEX-1313W-0011-R5b-SM-5L3EP 22.7
GTEX-1477Z-0011-R5b-SM-5PNUO 22.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 22.0
GTEX-NL3H-0011-R5a-SM-2I3GB 22.0
GTEX-139TT-0011-R5b-SM-5K7W8 21.3
GTEX-12WSA-0011-R5b-SM-5GU5I 21.2
GTEX-S7PM-0011-R5A-SM-3NM8G 21.0
GTEX-139T8-0011-R5b-SM-5J1MO 20.7
GTEX-145MG-0011-R5b-SM-5S2VU 20.7
GTEX-13NZA-0011-R5b-SM-5KM4K 20.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 20.0
GTEX-P44H-0011-R5A-SM-2XCEX 19.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 18.5
GTEX-13FHP-0011-R5b-SM-5LZY2 18.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 17.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 16.7
GTEX-11NV4-0011-R5a-SM-5NQ88 16.5
GTEX-WL46-0011-R5A-SM-3LK6V 15.4
GTEX-T2IS-0011-R5A-SM-32QP4 15.1
GTEX-12WSH-0011-R5b-SM-5P9F3 14.2
GTEX-QMR6-0011-R5A-SM-32PKT 13.0
GTEX-Z93S-0011-R5b-SM-4RGNI 10.1
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

102.8

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 102.8
FF:10164-103B2 76 years, female 124.6
FF:10379-105H1 89 years, female 80.9

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