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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:32.2TPM
GTEx:11.3RPKM
FANTOM5:36.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA019520

  

Antibody HPA019692

  

Adipocytes

 Not detected   Low  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Medium   Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Medium
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA019520

  

Antibody HPA019692

  

Adipocytes

 Not detected   Low  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Not detected   Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

32.2
N/A Female, age 80
Sample 1
TPM: 31.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 40.5
N/A Female, age 57
Sample 3
TPM: 32.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 32.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 24.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

11.3

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 10.9
Samples: 350

Max RPKM: 40.9
Min RPKM: 4.7
Std RPKM: 2.8
Median RPKM: 10.6
GTEX-POYW-0726-SM-2XCEO 40.9
GTEX-SNMC-1326-SM-2XCFK 21.1
GTEX-OXRK-0326-SM-3NB3R 20.8
GTEX-O5YT-0226-SM-32PK5 19.1
GTEX-XYKS-2726-SM-4E3IC 17.8
GTEX-117YX-2226-SM-5EGJJ 17.7
GTEX-WFJO-1926-SM-3GILA 17.7
GTEX-13NZ9-0526-SM-5J1OX 16.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 11.9
Samples: 227

Max RPKM: 82.8
Min RPKM: 5.1
Std RPKM: 7.6
Median RPKM: 10.5
GTEX-13IVO-2426-SM-5K7V9 82.8
GTEX-13PDP-1226-SM-5K7TW 71.0
GTEX-132AR-0526-SM-5J2MJ 48.4
GTEX-13S86-0926-SM-5SI6I 32.9
GTEX-ZF28-1426-SM-5S2OG 28.7
GTEX-131XG-0126-SM-5K7UJ 21.5
GTEX-WWTW-1326-SM-4MVNT 21.4
GTEX-XV7Q-1726-SM-4BRUU 21.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

36.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 36.2
FF:10010-101C1 65,65,76 years, mixed 36.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.