Tissue expression of HDAC3 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	22.5	TPM
GTEx:	17.1	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Medium
Glial cells:	Medium
Neuronal cells:	High
Neuropil:	Not detected

Antibody staining	Antibody HPA052052	Antibody CAB005583
Endothelial cells	Low	Medium
Glial cells	Medium	Medium
Neuronal cells	High	High
Neuropil	Not detected	Not detected

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	22.5

Male, age 5

Sample 1
TPM: 23.6

Female, age 40

Sample 2
TPM: 19.7

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 24.2

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	17.1

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 18.7

Samples: 114

Max RPKM: 35.3
Min RPKM: 8.8
Std RPKM: 3.6
Median RPKM: 19.1

GTEX-11OF3-2926-SM-5HL78

35.3

GTEX-X585-3026-SM-46MWF

28.9

GTEX-QDT8-2926-SM-32PKC

24.4

GTEX-T6MN-2626-SM-32PMQ

24.4

GTEX-13FXS-3126-SM-5J2NN

24.3

GTEX-ZAJG-3126-SM-5HL9J

24.2

GTEX-UTHO-3026-SM-3GAFB

23.4

GTEX-T5JC-2426-SM-3NMDB

23.1

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 15.4

Samples: 108

Max RPKM: 22.1
Min RPKM: 6.6
Std RPKM: 3.6
Median RPKM: 16.1

GTEX-X585-0011-R10A-SM-46MUY

22.1

GTEX-14ASI-0011-R10b-SM-5S2VZ

22.0

GTEX-QMR6-0011-R10A-SM-32PKO

21.7

GTEX-12WSF-0011-R10a-SM-5LZVH

21.3

GTEX-14BIL-0011-R10a-SM-5SI75

20.7

GTEX-13OW6-0011-R10a-SM-5L3HE

20.6

GTEX-T5JC-0011-R10A-SM-32PM2

20.6

GTEX-13RTJ-0011-R10b-SM-5O9CW

20.3

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue