Tissue expression of HDAC3 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	30.3	TPM
GTEx:	28.3	RPKM
FANTOM5:	5.8	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

High

Antibody staining	Antibody HPA052052	Antibody CAB005583
Squamous epithelial cells	High	Not detected

ESOPHAGUS - HPA RNA-seq

Average TPM	30.3

Female, age 70

Sample 1
TPM: 33.0

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 30.0

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 28.0

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	28.3

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 28.3

Samples: 286

Max RPKM: 44.4
Min RPKM: 12.9
Std RPKM: 4.5
Median RPKM: 27.6

GTEX-13PVQ-1726-SM-5IFF3

44.4

GTEX-XQ3S-1126-SM-4BOPK

42.5

GTEX-XOTO-2126-SM-4B64U

42.4

GTEX-XLM4-2326-SM-4TT2D

41.1

GTEX-11GSP-1826-SM-5N9DQ

40.7

GTEX-139UW-1126-SM-5IJEJ

39.8

GTEX-YECK-1626-SM-5IFHQ

39.0

GTEX-S95S-0426-SM-4B64I

38.5

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	5.8

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 5.8

FF:10015-101C6

68,74,75 years, mixed

5.8