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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA014784

 

Antibody CAB005079

 

Antibody CAB058689

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Santa Cruz Biotechnology
  Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA014784   sc-20812   AMAb90537  

Host species

Rabbit   Rabbit   Mouse  

Clonality

pAb   pAb   mAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Protein A/G   Protein A/G  

Other gene match

     

Released in version

4   2   12  

References

2      

VALIDATION SUMMARY

 
 

Antibody HPA014784

 

Antibody CAB005079

 

Antibody CAB058689

 
Immunocytochemistry

Approved   Approved    
Immunohistochemistry


Validated
 

Validated
  Supported  
Western blot

Uncertain   Uncertain   Uncertain  
Protein array

Supported      

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA014784

 

Antibody CAB005079

 

Antibody CAB058689

 

Standard validation

Approved   Approved    

     

Figure description

Immunofluorescent staining of human cell line U-251 MG shows localization to plasma membrane.   Immunofluorescent staining of human cell line A-431 shows localization to cell junctions.    

Antibody dilution

1:286   1:75    

Literature conformity

The subcellular location is partly supported by literature or no literature is available.   The subcellular location is partly supported by literature or no literature is available.    

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA014784

 

Antibody CAB005079

 

Antibody CAB058689

 

Formal validation: Orthogonal

Validated

Spearman correlation >0.6 for protein and RNA expression in tissues.
 
Validated

Spearman correlation >0.6 for protein and RNA expression in tissues.
   

 

 

 
 

 

   

Figure description

Distribution of protein expression (antibody staining) and RNA expression (TPM) across 37 tissues.   Distribution of protein expression (antibody staining) and RNA expression (TPM) across 37 tissues.    
 

Standard validation

Supported   Supported   Supported  

     

Figure description

Immunohistochemical staining of human cerebral cortex shows distinct positivity in a subset of glial cells.   Immunohistochemical staining of human cerebral cortex shows distinct positivity in a subset of glial cells.   Immunohistochemical staining of human lateral ventricle shows distinct positivity in subset of glial cells.  

Expression

RNA: detected in 11 tissues
Protein: detected in 10 cell types
  RNA: detected in 11 tissues
Protein: detected in 10 cell types
  RNA: detected in 11 tissues
Protein: detected in 19 cell types
 

Retrieval

HIER pH6   HIER pH6   HIER pH6  

Antibody dilution

1:3000   1:600   1:300  

Literature conformity

Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.  

RNA consistency

Consistent with RNA expression data.   Consistent with RNA expression data.   Consistent with RNA expression data.  
 

Standard validation

Supported      

     

Figure description

labelling of astrocyte endnote.      

WESTERN BLOT

 
 

Antibody HPA014784

 

Antibody CAB005079

 

Antibody CAB058689

 

Standard validation

Uncertain

Analysis performed using a standard panel of samples.
Current setup is not applicable due to low RNA count.
  Uncertain

Analysis performed using a standard panel of samples.
Current setup is not applicable due to low RNA count.
  Uncertain

Analysis performed using a standard panel of samples.
Current setup is not applicable due to low RNA count.
 

     

Figure description

     

Target mass (kDa)

34.8, 32.3, 31.8   34.8, 32.3, 31.8, 19.2   34.8, 32.3, 31.8, 19.2  

Antibody dilution

1:250   1:500   1:500  

PROTEIN ARRAY

 
 

Antibody HPA014784

 

Antibody CAB005079

 

Antibody CAB058689

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
     

     

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.      

Antibody dilution

1:3000      

ANTIGEN INFORMATION

 
 

Antibody HPA014784

 

Antibody CAB005079

 

Antibody CAB058689

 

Antigen

Recombinant protein fragment   Recombinant protein   Recombinant protein  

Length (aa)

71      

Antigen sequence

CPDVEFKRRFKEAFSKAAQQTKGSYMEVEDNRSQVETDDLILKPGVVHVI
DVDRGEEKKGKDQSGEVLSSV
     

Matching transcripts

AQP4-001 - ENSP00000372654 [100%]
AQP4-003 - ENSP00000462597 [100%]
AQP4-005 - ENSP00000393121 [100%]
AQP4-201 - ENSP00000484446 [100%]
     

Other gene match

     
ANTIGEN VIEW
AQP4-001
AQP4-003
AQP4-005
AQP4-201

RELEVANT PUBLICATIONS

 
 

Antibody HPA014784

 

Antibody CAB005079

 

Antibody CAB058689

 

1.

Human induced pluripotent stem cells are a novel source of neural progenitor cells (iNPCs) that migrate and integrate in the rodent spinal cord
Sareen D et al
J Comp Neurol 2014;522(12):2707-28
Application: ICC-IF, IHC
     

2.

Changes in cannabinoid receptors, aquaporin 4 and vimentin expression after traumatic brain injury in adolescent male mice. Association with edema and neurological deficit
Lopez-Rodriguez AB et al
PLoS One 2015;10(6):e0128782
Application: WB
     
 

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