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TISSUE ATLAS PRIMARY DATA CAUDATE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:77.1RPKM
FANTOM5:390.7Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA011893

 

Antibody CAB002519

 

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Medium  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

77.1

GTEx sample id

RPKM

30.467.5106.42.5195.8050100150200250300350
 
30.467.5106.42.5195.8050100150200250300350

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 77.1
Samples: 117

Max RPKM: 360.5
Min RPKM: 2.5
Std RPKM: 62.6
Median RPKM: 67.5
GTEX-T2IS-0011-R5A-SM-32QP4 360.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 355.5
GTEX-UTHO-0011-R5A-SM-3GIJD 258.6
GTEX-13G51-0011-R5a-SM-5L3EB 195.8
GTEX-T6MN-0011-R5A-SM-32QPD 189.6
GTEX-131YS-0011-R5b-SM-5K7YB 185.5
GTEX-PVOW-0011-R5A-SM-32PL7 160.4
GTEX-P44H-0011-R5A-SM-2XCEX 160.1
GTEX-12WSC-0011-R5b-SM-5CVNS 157.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 153.5
GTEX-1313W-0011-R5b-SM-5L3EP 152.6
GTEX-RU72-0011-R5A-SM-2TF6U 146.7
GTEX-WZTO-0011-R5B-SM-3NMC5 146.0
GTEX-13SLX-0011-R5a-SM-5O9BV 143.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 140.7
GTEX-S7SE-0011-R5A-SM-2XCDA 138.2
GTEX-13X6J-0011-R5b-SM-5PNWT 135.0
GTEX-WVLH-0011-R5A-SM-3MJFW 129.8
GTEX-13O3O-0011-R5b-SM-5KM44 128.8
GTEX-TSE9-0011-R5A-SM-3DB7J 127.4
GTEX-1399T-0011-R5b-SM-5IJDK 126.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 126.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 124.4
GTEX-145MH-0011-R5a-SM-5P9JT 123.7
GTEX-ZUA1-0011-R5b-SM-51MTG 117.6
GTEX-WL46-0011-R5A-SM-3LK6V 115.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 112.8
GTEX-Z93S-0011-R5b-SM-4RGNI 110.5
GTEX-13FXS-0011-R5b-SM-5LZYE 106.8
GTEX-13OW6-0011-R5a-SM-5O9BK 106.4
GTEX-145LS-0011-R5a-SM-5SI65 104.1
GTEX-13VXU-0011-R5a-SM-5O9D7 103.1
GTEX-132Q8-0011-R5a-SM-5IJDM 101.5
GTEX-12WSF-0011-R5a-SM-5HL8K 99.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 97.5
GTEX-14ABY-0011-R5b-SM-5SI7B 96.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 95.6
GTEX-N7MS-0011-R5a-SM-2HMK8 95.6
GTEX-139TT-0011-R5b-SM-5K7W8 94.4
GTEX-14BIM-0011-R5b-SM-5S2RM 94.3
GTEX-WWYW-0011-R5A-SM-3NB3E 94.0
GTEX-11OF3-0011-R5a-SM-57WB4 93.5
GTEX-11H98-0011-R5b-SM-57WCF 93.1
GTEX-11GSP-0011-R5a-SM-57WBE 89.2
GTEX-T5JC-0011-R5A-SM-32PLK 85.0
GTEX-QVJO-0011-R5A-SM-2S1QM 82.3
GTEX-13OVL-0011-R5b-SM-5L3FU 80.5
GTEX-N7MT-0011-R5a-SM-2I3G6 79.6
GTEX-X585-0011-R5A-SM-46MVI 79.5
GTEX-RVPU-0011-R5A-SM-2XCAD 79.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 76.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 76.5
GTEX-11NV4-0011-R5a-SM-5NQ88 75.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 74.1
GTEX-13X6I-0011-R5a-SM-5PNWW 70.2
GTEX-13CZV-0011-R5a-SM-5K7XA 70.0
GTEX-13FLW-0011-R5a-SM-5LZX6 69.3
GTEX-13OW7-0011-R5b-SM-5O9DM 68.1
GTEX-12WSD-0011-R5b-SM-5CVNG 67.5
GTEX-R55E-0011-R5A-SM-2TC5N 64.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 63.7
GTEX-13OVH-0011-R5b-SM-5KM4L 60.8
GTEX-13JUV-0011-R5a-SM-5LZY5 60.5
GTEX-13NYB-0011-R5a-SM-5MR45 58.8
GTEX-12ZZX-0011-R5a-SM-5HL89 57.2
GTEX-13S7M-0011-R5b-SM-5P9HS 55.0
GTEX-13FLV-0011-R5a-SM-5LZWT 54.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 53.8
GTEX-13X6K-0011-R5b-SM-5PNUE 51.8
GTEX-ZE7O-0011-R5a-SM-57WBO 51.5
GTEX-RVPV-0011-R5A-SM-2TF69 49.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 47.3
GTEX-QMR6-0011-R5A-SM-32PKT 44.8
GTEX-XMD1-0011-R5A-SM-4AT47 44.1
GTEX-NL4W-0011-R5a-SM-2I3GD 43.9
GTEX-XOTO-0011-R5A-SM-4B657 42.5
GTEX-13NYS-0011-R5a-SM-5MR4D 41.9
GTEX-14BIN-0011-R5b-SM-5SI78 41.5
GTEX-OHPN-0011-R5A-SM-2I5FF 41.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40.8
GTEX-13OW5-0011-R5b-SM-5L3FR 40.1
GTEX-13JVG-0011-R5a-SM-5MR4O 39.6
GTEX-OXRN-0011-R5A-SM-2I5EF 38.2
GTEX-ZXG5-0011-R5b-SM-57WBN 36.8
GTEX-12WSB-0011-R5b-SM-5GU67 36.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 35.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 34.1
GTEX-12WSH-0011-R5b-SM-5P9F3 30.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 29.8
GTEX-NL3H-0011-R5a-SM-2I3GB 29.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 28.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 27.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 26.7
GTEX-X261-0011-R5A-SM-3NMB4 24.3
GTEX-X4XX-0011-R5A-SM-46MWN 23.6
GTEX-YJ89-0011-R5a-SM-4V6GM 20.7
GTEX-NPJ7-0011-R5a-SM-33HBK 18.8
GTEX-13CIG-0011-R5b-SM-5L3F2 17.2
GTEX-12WSA-0011-R5b-SM-5GU5I 16.4
GTEX-ZV68-0011-R5a-SM-4YCDW 15.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 13.9
GTEX-11WQC-0011-R5a-SM-5BC74 13.6
GTEX-13112-0011-R5b-SM-5DUV8 13.6
GTEX-ZVT3-0011-R5a-SM-51MSI 13.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 12.8
GTEX-139TS-0011-R5b-SM-5J2MZ 11.1
GTEX-144GO-0011-R5a-SM-5PNUR 10.4
GTEX-144GL-0011-R5b-SM-5PNUJ 10.3
GTEX-1445S-0011-R5a-SM-5PNUS 8.7
GTEX-S7PM-0011-R5A-SM-3NM8G 8.3
GTEX-13CF2-0011-R5a-SM-5LZWS 7.0
GTEX-139T8-0011-R5b-SM-5J1MO 6.9
GTEX-1477Z-0011-R5b-SM-5PNUO 6.9
GTEX-13FHP-0011-R5b-SM-5LZY2 6.8
GTEX-13NZA-0011-R5b-SM-5KM4K 6.3
GTEX-145MG-0011-R5b-SM-5S2VU 3.0
GTEX-11UD1-0011-R5b-SM-5P9FP 2.5
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

390.7

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 390.7
FF:10164-103B2 76 years, female 537.7
FF:10379-105H1 89 years, female 243.7

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