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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:13.5RPKM
FANTOM5:47.2Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA001895

 

Antibody CAB000053

 

Antibody CAB078160

 

Glial cells

Low   Not detected   Not detected  

Neuronal cells

Medium   Not detected   Not detected  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

13.5

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 13.5
Samples: 117

Max RPKM: 27.9
Min RPKM: 4.3
Std RPKM: 4.1
Median RPKM: 12.9
GTEX-XMD1-0011-R5A-SM-4AT47 27.9
GTEX-OHPN-0011-R5A-SM-2I5FF 26.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 26.0
GTEX-132Q8-0011-R5a-SM-5IJDM 23.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 21.9
GTEX-X585-0011-R5A-SM-46MVI 21.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 20.2
GTEX-13FLV-0011-R5a-SM-5LZWT 20.1
GTEX-RVPV-0011-R5A-SM-2TF69 20.1
GTEX-X261-0011-R5A-SM-3NMB4 20.0
GTEX-13OW6-0011-R5a-SM-5O9BK 19.4
GTEX-13JVG-0011-R5a-SM-5MR4O 19.3
GTEX-QVJO-0011-R5A-SM-2S1QM 19.3
GTEX-NL3H-0011-R5a-SM-2I3GB 19.2
GTEX-13NYS-0011-R5a-SM-5MR4D 18.9
GTEX-13X6I-0011-R5a-SM-5PNWW 18.6
GTEX-X4XX-0011-R5A-SM-46MWN 18.6
GTEX-13JUV-0011-R5a-SM-5LZY5 17.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 17.6
GTEX-11GSP-0011-R5a-SM-57WBE 17.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 16.8
GTEX-N7MT-0011-R5a-SM-2I3G6 16.8
GTEX-144GO-0011-R5a-SM-5PNUR 16.7
GTEX-13OW5-0011-R5b-SM-5L3FR 16.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 16.4
GTEX-13NYB-0011-R5a-SM-5MR45 16.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 15.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 15.7
GTEX-13X6K-0011-R5b-SM-5PNUE 15.1
GTEX-12ZZX-0011-R5a-SM-5HL89 14.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 14.8
GTEX-NL4W-0011-R5a-SM-2I3GD 14.7
GTEX-N7MS-0011-R5a-SM-2HMK8 14.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 14.5
GTEX-13OW7-0011-R5b-SM-5O9DM 14.4
GTEX-13SLX-0011-R5a-SM-5O9BV 14.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 14.3
GTEX-RU72-0011-R5A-SM-2TF6U 14.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 14.0
GTEX-R55E-0011-R5A-SM-2TC5N 14.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 14.0
GTEX-11UD1-0011-R5b-SM-5P9FP 13.9
GTEX-13S7M-0011-R5b-SM-5P9HS 13.9
GTEX-WVLH-0011-R5A-SM-3MJFW 13.9
GTEX-WZTO-0011-R5B-SM-3NMC5 13.9
GTEX-13FLW-0011-R5a-SM-5LZX6 13.8
GTEX-13OVL-0011-R5b-SM-5L3FU 13.8
GTEX-144GL-0011-R5b-SM-5PNUJ 13.8
GTEX-14BIM-0011-R5b-SM-5S2RM 13.7
GTEX-WL46-0011-R5A-SM-3LK6V 13.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 13.7
GTEX-13FXS-0011-R5b-SM-5LZYE 13.6
GTEX-139TS-0011-R5b-SM-5J2MZ 13.4
GTEX-13OVH-0011-R5b-SM-5KM4L 13.4
GTEX-1399T-0011-R5b-SM-5IJDK 13.3
GTEX-13CIG-0011-R5b-SM-5L3F2 13.2
GTEX-13G51-0011-R5a-SM-5L3EB 13.2
GTEX-1445S-0011-R5a-SM-5PNUS 13.0
GTEX-14ABY-0011-R5b-SM-5SI7B 12.9
GTEX-11H98-0011-R5b-SM-57WCF 12.8
GTEX-145MH-0011-R5a-SM-5P9JT 12.8
GTEX-12WSF-0011-R5a-SM-5HL8K 12.7
GTEX-13VXU-0011-R5a-SM-5O9D7 12.7
GTEX-S7SE-0011-R5A-SM-2XCDA 12.7
GTEX-XOTO-0011-R5A-SM-4B657 12.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 12.6
GTEX-ZE7O-0011-R5a-SM-57WBO 12.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 12.4
GTEX-139T8-0011-R5b-SM-5J1MO 12.4
GTEX-WWYW-0011-R5A-SM-3NB3E 12.4
GTEX-131YS-0011-R5b-SM-5K7YB 12.3
GTEX-ZUA1-0011-R5b-SM-51MTG 12.3
GTEX-YFC4-0011-R5a-SM-4RGLR 12.2
GTEX-WHSE-0011-R5A-SM-3P5ZO 12.0
GTEX-12WSB-0011-R5b-SM-5GU67 11.9
GTEX-13112-0011-R5b-SM-5DUV8 11.9
GTEX-T5JC-0011-R5A-SM-32PLK 11.8
GTEX-ZVT3-0011-R5a-SM-51MSI 11.5
GTEX-145LS-0011-R5a-SM-5SI65 11.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 11.2
GTEX-T6MN-0011-R5A-SM-32QPD 11.2
GTEX-TSE9-0011-R5A-SM-3DB7J 11.2
GTEX-11OF3-0011-R5a-SM-57WB4 11.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 11.1
GTEX-14BIN-0011-R5b-SM-5SI78 11.1
GTEX-QMR6-0011-R5A-SM-32PKT 11.0
GTEX-S7PM-0011-R5A-SM-3NM8G 11.0
GTEX-ZXG5-0011-R5b-SM-57WBN 11.0
GTEX-P44H-0011-R5A-SM-2XCEX 10.8
GTEX-13FHP-0011-R5b-SM-5LZY2 10.6
GTEX-13NZA-0011-R5b-SM-5KM4K 10.6
GTEX-12WSD-0011-R5b-SM-5CVNG 10.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 10.5
GTEX-13CZV-0011-R5a-SM-5K7XA 10.4
GTEX-13X6J-0011-R5b-SM-5PNWT 10.2
GTEX-1313W-0011-R5b-SM-5L3EP 10.0
GTEX-13CF2-0011-R5a-SM-5LZWS 10.0
GTEX-1477Z-0011-R5b-SM-5PNUO 9.9
GTEX-ZV68-0011-R5a-SM-4YCDW 9.9
GTEX-11NV4-0011-R5a-SM-5NQ88 9.7
GTEX-UTHO-0011-R5A-SM-3GIJD 9.4
GTEX-YJ89-0011-R5a-SM-4V6GM 9.4
GTEX-12WSC-0011-R5b-SM-5CVNS 9.2
GTEX-11WQC-0011-R5a-SM-5BC74 9.1
GTEX-PVOW-0011-R5A-SM-32PL7 9.0
GTEX-145MG-0011-R5b-SM-5S2VU 8.9
GTEX-13O3O-0011-R5b-SM-5KM44 8.8
GTEX-OXRN-0011-R5A-SM-2I5EF 8.8
GTEX-12WSA-0011-R5b-SM-5GU5I 8.6
GTEX-NPJ7-0011-R5a-SM-33HBK 8.5
GTEX-RVPU-0011-R5A-SM-2XCAD 8.4
GTEX-Z93S-0011-R5b-SM-4RGNI 8.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 8.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 7.2
GTEX-139TT-0011-R5b-SM-5K7W8 5.8
GTEX-12WSH-0011-R5b-SM-5P9F3 4.3
GTEX-T2IS-0011-R5A-SM-32QP4 4.3
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

47.2

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 47.2
FF:10164-103B2 76 years, female 61.5
FF:10379-105H1 89 years, female 32.8

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