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TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:39.2TPM
GTEx:58.0RPKM
FANTOM5:208.2Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Low
Cells in tubules:Low
 

Antibody staining

Antibody HPA001895

 

Antibody CAB000053

 

Antibody CAB078160

 

Cells in glomeruli

High   Low   High  

Cells in tubules

Medium   Low   Not detected  
     
     
     

KIDNEY - HPA RNA-seq

Average TPM

39.2

overview Female, age 58
Sample 1
TPM: 56.9
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 41.4
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 57.9
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 47.2
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 16.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 34.0
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 17.1
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 50.7
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 30.9
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

58.0

GTEx sample id

RPKM

44.959.567.322.785.80102030405060708090100110
 
44.959.567.322.785.80102030405060708090100110

Kidney - Cortex

Kidney - Cortex
RPKM: 58.0
Samples: 32

Max RPKM: 115.8
Min RPKM: 22.7
Std RPKM: 19.7
Median RPKM: 59.5
GTEX-RN64-1626-SM-48FD7 115.8
GTEX-13112-2126-SM-5GCO4 85.8
GTEX-ZVZP-0926-SM-5GIDB 85.5
GTEX-147F4-2626-SM-5Q5CS 81.3
GTEX-13OVI-1126-SM-5KLZF 79.7
GTEX-ZLFU-0926-SM-5P9F8 78.1
GTEX-145MN-0326-SM-5QGQI 67.8
GTEX-12696-0926-SM-5FQTV 67.7
GTEX-11TTK-1926-SM-5PNW8 67.2
GTEX-1497J-0826-SM-5NQAJ 66.6
GTEX-XPVG-0526-SM-4B65N 66.5
GTEX-1399S-0526-SM-5IJG8 66.3
GTEX-ZYFG-1626-SM-5GZYY 66.1
GTEX-ZYT6-2226-SM-5GIC9 65.4
GTEX-13RTJ-2226-SM-5S2Q1 64.6
GTEX-UPIC-1126-SM-4IHLO 60.0
GTEX-13OVL-1826-SM-5KLZR 59.0
GTEX-ZC5H-1726-SM-5HL7X 52.3
GTEX-QDVN-1626-SM-48TZC 48.1
GTEX-QLQW-1626-SM-4R1K1 47.6
GTEX-13NYB-1726-SM-5N9G2 47.4
GTEX-12WSG-0826-SM-5EQ5A 47.3
GTEX-P4QS-1126-SM-3NMD5 47.2
GTEX-11GS4-2326-SM-5A5KS 45.3
GTEX-Y5V6-2026-SM-5IFHO 43.8
GTEX-13OW6-1826-SM-5N9F9 42.3
GTEX-NPJ8-2226-SM-3TW8D 41.0
GTEX-T5JC-1526-SM-4DM68 39.6
GTEX-11OF3-1326-SM-5N9FJ 34.1
GTEX-N7MS-1626-SM-3LK5F 27.5
GTEX-13O1R-2526-SM-5N9FW 26.1
GTEX-ZYFD-1526-SM-5NQ7T 22.7
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

208.2

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 208.2
FF:10017-101C8 60,62,63 years, female 208.2

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