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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:47.5TPM
GTEx:42.4RPKM
FANTOM5:80.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Low
 
 
 

Antibody staining

Antibody HPA036986

  

Antibody HPA036987

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Low   Not detected  
      
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Low
Fibroblasts:Low
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA036986

  

Antibody HPA036987

  

Adipocytes

 Not detected   Not detected  

Chondrocytes

 Low   Low  

Fibroblasts

 Low   Not detected  

Peripheral nerve

 Not detected   Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

47.5
N/A Female, age 80
Sample 1
TPM: 49.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 46.0
N/A Female, age 57
Sample 3
TPM: 30.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 51.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 59.6
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

42.4

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 45.7
Samples: 350

Max RPKM: 71.9
Min RPKM: 16.2
Std RPKM: 7.3
Median RPKM: 44.9
GTEX-11GSO-2326-SM-5A5LX 71.9
GTEX-X5EB-2426-SM-4E3HX 71.7
GTEX-13OVI-1326-SM-5IJBO 65.7
GTEX-X15G-2326-SM-4PQZS 62.9
GTEX-XBEC-0326-SM-4AT4M 62.7
GTEX-Z93T-0226-SM-5HL5Z 61.8
GTEX-W5X1-2626-SM-4LMI8 61.1
GTEX-P4PP-0226-SM-5S2VR 60.7
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 37.3
Samples: 227

Max RPKM: 65.9
Min RPKM: 12.4
Std RPKM: 7.6
Median RPKM: 37.4
GTEX-13X6H-1726-SM-5Q5EH 65.9
GTEX-W5X1-1426-SM-3GIKH 58.9
GTEX-XLM4-1026-SM-4AT51 56.3
GTEX-ZPIC-0726-SM-57WFM 54.4
GTEX-13FHO-2026-SM-5J1OA 53.2
GTEX-XUZC-1126-SM-4BOPZ 52.6
GTEX-145LV-1026-SM-5O9AE 51.6
GTEX-ZYT6-2126-SM-5GZZ4 50.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

80.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 80.5
FF:10010-101C1 65,65,76 years, mixed 80.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.