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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:23.4TPM
GTEx:21.2RPKM
FANTOM5:83.9Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Low
 

Antibody staining

Antibody HPA036986

 

Antibody HPA036987

 

Bile duct cells

Not detected   Low  

Hepatocytes

Low   Medium  
   
   
   

LIVER - HPA RNA-seq

Average TPM

23.4

N/A Female, age 60
Sample 1
TPM: 19.5
overview Male, age 54
Sample 2
TPM: 17.5
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 16.7
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 18.3
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 17.6
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 30.6
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 25.1
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 23.9
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 22.7
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 42.4
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

21.2

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 21.2
Samples: 119

Max RPKM: 41.8
Min RPKM: 10.5
Std RPKM: 5.2
Median RPKM: 20.2
GTEX-13N11-0926-SM-5IJG2 41.8
GTEX-S32W-1926-SM-4AD63 36.9
GTEX-UPIC-0926-SM-4IHLV 36.2
GTEX-12WSG-0626-SM-5FQTQ 35.6
GTEX-14C38-1526-SM-5RQJ7 35.1
GTEX-1497J-0726-SM-5Q5D1 32.1
GTEX-RN64-1826-SM-48FDV 31.4
GTEX-Y5LM-0426-SM-4VBRO 31.4
GTEX-QDVN-0826-SM-48TZ2 29.7
GTEX-12696-0826-SM-5EGGE 29.2
GTEX-13NZ9-1326-SM-5MR3V 28.7
GTEX-YB5E-0326-SM-5IFHU 28.5
GTEX-UTHO-2426-SM-4JBHD 28.0
GTEX-13FTW-1126-SM-5J2NV 27.4
GTEX-13113-1326-SM-5GCOI 26.4
GTEX-ZAB4-0826-SM-5LU9D 26.4
GTEX-QESD-2026-SM-447BI 26.2
GTEX-S4Z8-0526-SM-4AD4T 25.7
GTEX-WFON-1726-SM-4LVMQ 25.7
GTEX-WZTO-0626-SM-4PQYY 25.7
GTEX-11EQ9-0526-SM-5A5JZ 25.3
GTEX-147F4-1426-SM-5LUA8 25.1
GTEX-ZF29-2026-SM-4WWB7 24.2
GTEX-QEG4-1826-SM-4R1JN 23.9
GTEX-RNOR-1426-SM-48FDJ 23.7
GTEX-145MF-0826-SM-5QGQA 23.5
GTEX-131XH-0626-SM-5LZWH 23.4
GTEX-REY6-1226-SM-48FDR 23.3
GTEX-ZVP2-0626-SM-51MSO 23.3
GTEX-13NYB-1026-SM-5IFH3 23.2
GTEX-RTLS-1326-SM-46MUN 23.0
GTEX-T6MN-1226-SM-3NMA5 22.5
GTEX-ZTPG-1426-SM-51MT3 22.5
GTEX-QEL4-1226-SM-447A4 22.3
GTEX-SJXC-1226-SM-4DM78 22.3
GTEX-11OF3-0726-SM-5BC4Z 22.2
GTEX-PX3G-0826-SM-48TZS 22.2
GTEX-X4EO-1126-SM-4QARQ 22.2
GTEX-Q734-0326-SM-48U15 22.1
GTEX-146FH-1526-SM-5NQBU 21.8
GTEX-WYVS-1926-SM-4PQZ2 21.8
GTEX-P78B-1326-SM-3P611 21.6
GTEX-11NV4-1326-SM-5HL6V 21.4
GTEX-R53T-0326-SM-48FEC 21.3
GTEX-ZZPU-0426-SM-5GZYH 21.3
GTEX-13PVR-0126-SM-5S2PY 21.2
GTEX-13SLX-1226-SM-5S2Q6 21.2
GTEX-XBEC-1526-SM-4AT68 21.2
GTEX-OOBJ-0826-SM-3NB2K 21.1
GTEX-RU72-1426-SM-46MUF 21.1
GTEX-131YS-1626-SM-5HL6C 21.0
GTEX-ZYT6-0626-SM-5E45V 21.0
GTEX-12WSL-0226-SM-5CVMJ 20.8
GTEX-YEC4-0826-SM-5P9FV 20.7
GTEX-11DXY-0526-SM-5EGGQ 20.5
GTEX-13112-1426-SM-5EGH8 20.5
GTEX-WQUQ-1926-SM-4OOSA 20.5
GTEX-13FLV-0326-SM-5N9DJ 20.3
GTEX-ZVT3-1626-SM-5GU66 20.3
GTEX-14AS3-0126-SM-5Q5F4 20.2
GTEX-1399T-0826-SM-5IFES 20.1
GTEX-13FTZ-0726-SM-5IFFY 20.0
GTEX-12WSI-0226-SM-5GCNA 19.9
GTEX-YECK-1926-SM-4W21H 19.9
GTEX-ZYY3-0626-SM-5NQ6W 19.9
GTEX-XOTO-0826-SM-4B65O 19.6
GTEX-139TS-1426-SM-5IFJD 19.5
GTEX-139YR-0226-SM-5IFEM 19.5
GTEX-12KS4-1326-SM-5LUB3 19.4
GTEX-RWSA-1426-SM-47JXA 19.4
GTEX-11DXZ-0126-SM-5EGGY 19.1
GTEX-12WSD-1426-SM-5GCN9 19.1
GTEX-12WSM-0726-SM-5GCOW 19.1
GTEX-132NY-0926-SM-5P9G3 19.1
GTEX-11ZVC-0726-SM-5FQT9 18.9
GTEX-X3Y1-2726-SM-4PQZH 18.8
GTEX-RM2N-1926-SM-48FCU 18.6
GTEX-YFC4-1526-SM-5IFJS 18.6
GTEX-S33H-1626-SM-4AD68 18.5
GTEX-Y5V5-0926-SM-4VBPZ 18.4
GTEX-13N2G-0926-SM-5IFGJ 18.3
GTEX-TKQ2-1726-SM-4DXUP 18.3
GTEX-1212Z-0226-SM-59HLF 18.2
GTEX-139TU-0826-SM-5IJFG 18.2
GTEX-144GM-1326-SM-5LU5E 18.2
GTEX-13OW6-2626-SM-5IFF2 18.1
GTEX-ZAB5-0426-SM-5CVMI 18.1
GTEX-145LU-1326-SM-5LU9N 18.0
GTEX-14E1K-0326-SM-5S2PE 18.0
GTEX-QV44-0326-SM-4R1KD 18.0
GTEX-ZPU1-0826-SM-57WG2 18.0
GTEX-11ZUS-2526-SM-59872 17.9
GTEX-13VXU-0926-SM-5IFFH 17.9
GTEX-VUSG-0126-SM-4KL1X 17.9
GTEX-14A5I-1726-SM-5QGQ5 17.6
GTEX-X4EP-1026-SM-4QAS5 17.6
GTEX-X4XY-1626-SM-46MVN 17.5
GTEX-145MO-2326-SM-5NQ9K 17.4
GTEX-X261-1726-SM-4PQYT 17.4
GTEX-Z9EW-0426-SM-5CVM9 17.4
GTEX-Q2AG-1126-SM-48U1P 17.3
GTEX-ZF2S-3026-SM-4WWCH 17.1
GTEX-11NUK-1226-SM-5P9GM 17.0
GTEX-14DAQ-1726-SM-5S2R2 16.9
GTEX-11WQC-0726-SM-5EQMR 16.8
GTEX-1399R-1226-SM-5P9GF 16.5
GTEX-11ZTS-1426-SM-5EQMM 16.2
GTEX-13O3O-1826-SM-5IFGW 16.1
GTEX-13NZB-0626-SM-5IFH6 16.0
GTEX-1269C-0626-SM-5FQSS 15.4
GTEX-147JS-1126-SM-5RQIW 15.0
GTEX-UPK5-1426-SM-4JBHH 14.6
GTEX-U3ZN-0226-SM-3DB8D 14.4
GTEX-11GSP-0626-SM-5986T 14.2
GTEX-14753-1626-SM-5NQ9L 13.6
GTEX-131XE-0326-SM-5LZVO 13.5
GTEX-ZVT4-0626-SM-5E45T 13.5
GTEX-13QJC-0726-SM-5RQJK 12.5
GTEX-12ZZZ-1326-SM-59HKW 10.5
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

83.9

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 83.9
FF:10018-101C9 64,69,70 years, mixed 83.9

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