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CCL19

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:32.9TPM
GTEx:5.9RPKM
FANTOM5:13.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA067758

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

32.9
overview Male, age 54
Sample 1
TPM: 8.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 30.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 14.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 6.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 131.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 1.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 57.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 10.0
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 19.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 55.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 43.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 34.0
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 15.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.9

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 2.5
Samples: 149

Max RPKM: 67.8
Min RPKM: 0
Std RPKM: 9
Median RPKM: 0.4
GTEX-146FH-2426-SM-5Q5EW 67.8
GTEX-ZC5H-2426-SM-4WAZ6 57.0
GTEX-13X6K-2726-SM-5O9DG 53.8
GTEX-WI4N-2226-SM-4OOS9 33.8
GTEX-11PRG-2026-SM-5GU5F 18.4
GTEX-YJ8A-1726-SM-5P9IQ 17.8
GTEX-11TT1-0926-SM-5GU5M 10.7
GTEX-13OW6-2226-SM-5N9FL 9.8
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 8.5
Samples: 196

Max RPKM: 111.6
Min RPKM: 0
Std RPKM: 15.8
Median RPKM: 1.5
GTEX-13O3O-2526-SM-5L3DR 111.6
GTEX-Q2AH-1226-SM-48TZL 82.8
GTEX-147JS-2526-SM-5S2Q8 67.6
GTEX-R53T-1326-SM-48FCQ 63.1
GTEX-WHWD-1226-SM-4OOS1 59.5
GTEX-11ZVC-2126-SM-5EGJ1 53.9
GTEX-UPIC-1726-SM-4IHKG 52.2
GTEX-XMK1-1726-SM-4B64Z 49.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

13.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 13.2
FF:10014-101C5 62,83,84 years, mixed 13.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.