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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:33.3TPM
GTEx:15.0RPKM
FANTOM5:47.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody CAB004580

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 
 

Antibody staining

Antibody CAB004580

  

Adipocytes

 Medium  

Fibroblasts

 Medium  

Peripheral nerve

 Medium  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

33.3
N/A Female, age 80
Sample 1
TPM: 30.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 27.1
N/A Female, age 57
Sample 3
TPM: 23.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 44.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 40.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

15.0

GTEx sample id

RPKM
14.416.418.48.823.50246810121416182022242628
 
14.416.418.48.823.50246810121416182022242628

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 16.5
Samples: 350

Max RPKM: 28
Min RPKM: 8.8
Std RPKM: 3.1
Median RPKM: 16.4
GTEX-12WSA-0326-SM-5BC6I 28.0
GTEX-R55F-1426-SM-2TF53 27.1
GTEX-POYW-0726-SM-2XCEO 26.3
GTEX-TSE9-0226-SM-3DB84 26.0
GTEX-ZE7O-0226-SM-5S2N1 25.8
GTEX-P44H-0326-SM-2XCES 25.5
GTEX-13NZ9-0526-SM-5J1OX 24.9
GTEX-11PRG-0626-SM-5BC56 23.5
Show all
9.812.715.65.420.6024681012141618202224
 
9.812.715.65.420.6024681012141618202224

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 12.8
Samples: 227

Max RPKM: 25.2
Min RPKM: 5.4
Std RPKM: 3.6
Median RPKM: 12.7
GTEX-11NV4-1426-SM-5BC4W 25.2
GTEX-13W46-1226-SM-5SIAS 20.6
GTEX-12ZZW-2326-SM-5DUW2 20.4
GTEX-11DXY-0326-SM-5H12F 20.3
GTEX-13PL6-0926-SM-5KLYY 20.1
GTEX-13JUV-0626-SM-5J1MQ 20.0
GTEX-1117F-1326-SM-5EGHH 19.9
GTEX-ZE9C-1326-SM-5S2OW 19.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

47.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 47.7
FF:10010-101C1 65,65,76 years, mixed 47.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.