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Field

Term
Gene name

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Chromosome

External id

In atlas

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Validation

Method

Validation

Method

Validation

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Searches

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Expression

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Specificity

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Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA URINARY BLADDER
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Urinary bladder

URINARY BLADDER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:43.6TPM
GTEx:12.7RPKM
FANTOM5:45.1Tags Per Million

URINARY BLADDER - Annotated protein expression

Annotated protein
expression

Urothelial cells:Not detected
 

Antibody staining

Antibody CAB004580

 

Urothelial cells

Not detected  
 

URINARY BLADDER - HPA RNA-seq

Average TPM

43.6

overview Male, age 74
Sample 1
TPM: 42.6
Cell types%
Urothelial cells: 5
Smooth muscle cells: 60
Fibroblasts: 20
Endothelial cells: 10
Other cell types: 5
overview Male, age 80
Sample 2
TPM: 44.7
Cell types%
Urothelial cells: 10
Smooth muscle cells: 45
Fibroblasts: 15
Endothelial cells: 10
Other cell types: 20

URINARY BLADDER - GTEx RNA-seq

Average RPKM

12.7

GTEx sample id

RPKM

10.413.414.97.417.40246810121416
 
10.413.414.97.417.40246810121416

Bladder

Bladder
RPKM: 12.7
Samples: 11

Max RPKM: 17.4
Min RPKM: 7.4
Std RPKM: 2.8
Median RPKM: 13.4
GTEX-SNOS-0526-SM-4DM54 17.4
GTEX-S4UY-0926-SM-4AD6O 15.5
GTEX-SNMC-0826-SM-4DM66 15.1
GTEX-U3ZN-1226-SM-4DXUD 14.8
GTEX-S4Q7-0926-SM-4AD5D 13.8
GTEX-S3XE-1226-SM-4AD4L 13.4
GTEX-U4B1-1226-SM-4DXT7 11.2
GTEX-TMMY-1526-SM-4DXST 10.8
GTEX-S32W-1126-SM-4AD5V 10.1
GTEX-U3ZM-0826-SM-4DXU6 10.1
GTEX-SE5C-1026-SM-4BRUG 7.4
Show all

URINARY BLADDER - FANTOM5 CAGE

Average Tags Per Million

45.1

FANTOM5 sample id

Sample description

Tags Per Million

Bladder
Tags Per Million: 45.1
FF:10011-101C2 55,58,79 years, mixed 45.1

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