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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA003891

 

Antibody CAB022442

 

Antibody CAB022443

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Chemicon
  Chemicon
 

Product name

HPA003891   MAB3741   MAB3740  

Host species

Rabbit   Mouse   Mouse  

Clonality

pAb   mAb   mAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Serum   Serum  

Other gene match

     

Released in version

16   5   5  

References

     

VALIDATION SUMMARY

 
 

Antibody HPA003891

 

Antibody CAB022442

 

Antibody CAB022443

 
Immunocytochemistry

Supported   Supported    
Immunohistochemistry

  Supported   Supported  
Western blot

Uncertain   Uncertain   Uncertain  
Protein array

Supported      

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA003891

 

Antibody CAB022442

 

Antibody CAB022443

 

Standard validation

Supported   Supported    

     

Figure description

Immunofluorescent staining of human cell line CACO-2 shows localization to plasma membrane.   Immunofluorescent staining of human cell line U-2 OS shows localization to plasma membrane.    

Antibody dilution

1:114   1:200    

Literature conformity

The subcellular location is supported by literature.   The subcellular location is supported by literature.    

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA003891

 

Antibody CAB022442

 

Antibody CAB022443

 

Standard validation

  Supported   Supported  

     

Figure description

  Immunohistochemical staining of human duodenum shows strong cytoplasmic and membranous positivity in glandular cells.   Immunohistochemical staining of human duodenum shows strong cytoplasmic positivity with additional membranous staining in glandular cells.  

Expression

  RNA: detected in 36 tissues
Protein: detected in 33 cell types
  RNA: detected in 36 tissues
Protein: detected in 49 cell types
 

Retrieval

  HIER pH6   HIER pH6  

Antibody dilution

  1:1500   1:2500  

Literature conformity

  Partly consistent with gene/protein characterization data.   Partly consistent with gene/protein characterization data.  

RNA consistency

  Mainly not consistent with RNA expression data.   Mainly not consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA003891

 

Antibody CAB022442

 

Antibody CAB022443

 

Standard validation

Uncertain

Analysis performed using a standard panel of samples.
Only bands not corresponding to the predicted size.
  Uncertain

Analysis performed using a standard panel of samples.
Only bands not corresponding to the predicted size.
  Uncertain

Analysis performed using a standard panel of samples.
Only bands not corresponding to the predicted size.
 

     

Figure description

     

Target mass (kDa)

165.1, 163.7, 157.1   165.1, 163.7, 157.1, 32.3, 28.8, 26.5, 23, 18.7   165.1, 163.7, 157.1, 32.3, 28.8, 26.5, 23, 18.7  

Antibody dilution

1:250   1:500   1:500  

PROTEIN ARRAY

 
 

Antibody HPA003891

 

Antibody CAB022442

 

Antibody CAB022443

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
     

     

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.      

Antibody dilution

1:3000      

ANTIGEN INFORMATION

 
 

Antibody HPA003891

 

Antibody CAB022442

 

Antibody CAB022443

 

Antigen

Recombinant protein fragment   Synthetic peptide   Synthetic peptide  

Length (aa)

130      

Antigen sequence

STRQEMTVMVNSMDKSYAEQGTNCDEAFSFMDTHNLNGRSVSSPSSFTMK
TNTLSTSVPNSYYPDETHTMASDTSSLVQSHTYKKREPADVPYQTGQLHP
AIRVADLLQHITQMKCAEGYGFKEEYEVST
     

Matching transcripts

PTPRM-001 - ENSP00000331418 [98%]
PTPRM-003 - ENSP00000382927 [98%]
PTPRM-012 - ENSP00000463325 [89%]
     

Other gene match

     
ANTIGEN VIEW
PTPRM-001
PTPRM-003
PTPRM-012
 

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The Human Protein Atlas project is funded
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