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GOLIM4

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:28.0TPM
GTEx:11.6RPKM
FANTOM5:26.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
 
 
 

Antibody staining

Antibody HPA001677

  

Antibody HPA002315

  

Adipocytes

 Not detected   Low  

Fibroblasts

 Not detected   Not detected  
      
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Medium
 
 
 

Antibody staining

Antibody HPA001677

  

Antibody HPA002315

  

Adipocytes

 Low   Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Medium  
      
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

28.0
N/A Female, age 80
Sample 1
TPM: 30.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 22.9
N/A Female, age 57
Sample 3
TPM: 21.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 36.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 28.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

11.6

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 11.6
Samples: 350

Max RPKM: 20.7
Min RPKM: 4.3
Std RPKM: 2.7
Median RPKM: 11.4
GTEX-11ONC-2526-SM-5986W 20.7
GTEX-SIU8-0226-SM-2XCDS 18.5
GTEX-111FC-0226-SM-5N9B8 18.1
GTEX-13SLX-0426-SM-5QGRC 18.1
GTEX-11PRG-0626-SM-5BC56 17.8
GTEX-R55F-1426-SM-2TF53 17.8
GTEX-WL46-0326-SM-3LK6Y 17.7
GTEX-145MF-0526-SM-5LUA6 17.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 11.7
Samples: 227

Max RPKM: 22.7
Min RPKM: 4
Std RPKM: 3.4
Median RPKM: 11.3
GTEX-11NV4-1426-SM-5BC4W 22.7
GTEX-11PRG-1526-SM-5HL6Z 21.7
GTEX-YECK-1426-SM-5IFHE 20.1
GTEX-11ZTS-1326-SM-5EQMA 19.6
GTEX-12WSC-1726-SM-5GCN3 18.9
GTEX-13S86-0926-SM-5SI6I 18.6
GTEX-113JC-0726-SM-5GZZR 18.5
GTEX-13NYS-0726-SM-5J1OR 18.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

26.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 26.5
FF:10010-101C1 65,65,76 years, mixed 26.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.