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Gene name

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Method

Validation

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Cell type

Expression

Tissue

Specificity

Cell line

Specificity

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Detectable

Cell line

Detectable

Category

Score

Score

Score

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SMIM19
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TISSUE ATLAS PRIMARY DATA TESTIS

GENE/PROTEIN

Antibody validation


Dictionary

Testis

Tissue proteome

Testis

TESTIS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:74.6TPM
GTEx:13.8RPKM
FANTOM5:77.9Tags Per Million

TESTIS - Annotated protein expression

Annotated protein
expression

Cells in seminiferous ducts:Medium
Leydig cells:Medium
 

Antibody staining

Antibody HPA011145

 

Cells in seminiferous ducts

Medium  

Leydig cells

Medium  
 
 
 

TESTIS - HPA RNA-seq

Average TPM

74.6

overview Male, age 56
Sample 1
TPM: 73.7
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 2
TPM: 69.0
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25
overview Male, age 62
Sample 3
TPM: 61.2
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 34
Sample 4
TPM: 74.6
Cell types%
Cells in seminiferous ducts: 60
Other cell types: 40
overview Male, age 26
Sample 5
TPM: 66.4
Cell types%
Cells in seminiferous ducts: 55
Other cell types: 45
overview Male, age 50
Sample 6
TPM: 55.2
Cell types%
Cells in seminiferous ducts: 85
Other cell types: 15
overview Male, age 37
Sample 7
TPM: 63.0
Cell types%
Cells in seminiferous ducts: 35
Other cell types: 65
overview Male, age 51
Sample 8
TPM: 99.2
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 9
TPM: 73.2
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 26
Sample 10
TPM: 110.8
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25

TESTIS - GTEx RNA-seq

Average RPKM

13.8

GTEx sample id

RPKM

 

Testis

Testis
RPKM: 13.8
Samples: 172

Max RPKM: 19.6
Min RPKM: 8.7
Std RPKM: 1.9
Median RPKM: 13.7
GTEX-R55E-0726-SM-48FCZ 19.6
GTEX-14ABY-0626-SM-5Q5C9 19.1
GTEX-11WQC-2326-SM-5EQKE 17.8
GTEX-Z93S-1726-SM-5HL8G 17.7
GTEX-117XS-2026-SM-5GID1 17.4
GTEX-PW2O-1426-SM-48TCD 17.2
GTEX-T6MN-2026-SM-4DM7L 17.2
GTEX-YEC4-1526-SM-4W1YU 17.2
GTEX-Y8E4-2226-SM-5LU94 17.1
GTEX-S7PM-0626-SM-4AD4Q 17.0
GTEX-13OVL-0426-SM-5IFG6 16.9
GTEX-YJ89-0626-SM-4TT3Z 16.8
GTEX-XLM4-1526-SM-4AT6D 16.7
GTEX-11EQ8-1426-SM-5EGJR 16.6
GTEX-XQ3S-2726-SM-4BOP2 16.6
GTEX-ZQUD-2026-SM-51MSM 16.6
GTEX-11NV4-1726-SM-5N9FC 16.5
GTEX-V1D1-2126-SM-4JBH4 16.5
GTEX-WK11-0326-SM-4OOS6 16.4
GTEX-111VG-1926-SM-5GIDO 16.3
GTEX-13FHP-2826-SM-5IJFW 16.3
GTEX-145MO-0126-SM-5S2QU 16.1
GTEX-12696-0226-SM-5EGL3 16.0
GTEX-ZYFC-0126-SM-5GIEH 16.0
GTEX-13OW5-2526-SM-5L3I1 15.8
GTEX-REY6-0126-SM-48FDT 15.8
GTEX-11ZUS-2726-SM-5FQUA 15.7
GTEX-TKQ1-0926-SM-4DXU2 15.7
GTEX-YFCO-1726-SM-4W21S 15.7
GTEX-13VXU-0726-SM-5J2O7 15.6
GTEX-117YW-1526-SM-5EGGP 15.5
GTEX-1212Z-0326-SM-5FQSJ 15.5
GTEX-13FLW-2126-SM-5N9FD 15.5
GTEX-QEG4-0126-SM-48TZE 15.4
GTEX-S7SE-0326-SM-4AT5Q 15.4
GTEX-ZPU1-2126-SM-57WED 15.4
GTEX-13112-0226-SM-5P9IV 15.3
GTEX-ZYT6-2726-SM-5GICP 15.3
GTEX-12WSI-2126-SM-5GCMV 15.2
GTEX-139TT-2226-SM-5LZWO 15.2
GTEX-T5JC-0726-SM-4DM55 15.2
GTEX-ZTSS-1526-SM-51MTC 15.2
GTEX-OXRL-2126-SM-3NM98 15.1
GTEX-TKQ2-1526-SM-4DXUN 15.1
GTEX-YF7O-2026-SM-4W1YE 15.1
GTEX-N7MS-0126-SM-3TW8O 15.0
GTEX-131XE-0426-SM-5IJF4 14.9
GTEX-139TS-1726-SM-5IJG5 14.9
GTEX-V955-1926-SM-4KL1L 14.9
GTEX-Y111-2426-SM-4TT23 14.9
GTEX-11GS4-2026-SM-5N9CP 14.8
GTEX-OOBJ-2126-SM-3NB1N 14.8
GTEX-SUCS-1326-SM-4DM5T 14.8
GTEX-12ZZY-0126-SM-5LZV2 14.7
GTEX-144GL-0726-SM-5LU4P 14.7
GTEX-14753-0626-SM-5Q5CY 14.7
GTEX-WH7G-1926-SM-4LVMM 14.7
GTEX-12C56-1426-SM-5FQSW 14.6
GTEX-OIZI-0126-SM-3NB13 14.6
GTEX-111FC-1926-SM-5GZYC 14.5
GTEX-12WSH-0326-SM-5GCNH 14.5
GTEX-12WSL-2326-SM-5DUXQ 14.5
GTEX-12WSM-1326-SM-5GCP9 14.5
GTEX-ZTX8-1126-SM-51MRM 14.5
GTEX-11OF3-1826-SM-5987N 14.4
GTEX-WHSB-2126-SM-4M1XF 14.4
GTEX-XBEC-0126-SM-4GIDT 14.4
GTEX-ZAB5-2426-SM-5CVMW 14.4
GTEX-13111-1526-SM-5EGJX 14.3
GTEX-11EI6-2226-SM-5EGJM 14.2
GTEX-13OVH-0726-SM-5N9BU 14.2
GTEX-13OW6-0126-SM-5IJGM 14.2
GTEX-S95S-1126-SM-4B64E 14.2
GTEX-WFG8-1926-SM-4LVM1 14.2
GTEX-139T6-1226-SM-5IFFC 14.1
GTEX-Y5V6-1726-SM-4VDSZ 14.1
GTEX-111CU-1726-SM-5EGHM 14.0
GTEX-147JS-0126-SM-5S2TW 14.0
GTEX-14A6H-2326-SM-5Q5B5 13.9
GTEX-QEG5-0126-SM-4R1JR 13.9
GTEX-11LCK-2326-SM-5HL53 13.8
GTEX-13N1W-2626-SM-5IJEP 13.8
GTEX-SNMC-1026-SM-4DM7K 13.8
GTEX-ZDYS-1326-SM-5IJFF 13.8
GTEX-ZVTK-0126-SM-57WDG 13.8
GTEX-11NUK-2626-SM-5A5MB 13.7
GTEX-11TUW-2226-SM-5EQL9 13.7
GTEX-QLQ7-1426-SM-4R1JX 13.7
GTEX-XGQ4-2026-SM-4AT6G 13.7
GTEX-ZVZP-2226-SM-57WBF 13.7
GTEX-13N2G-0126-SM-5N9DV 13.6
GTEX-QV31-1126-SM-4R1K4 13.6
GTEX-XAJ8-1326-SM-47JYT 13.6
GTEX-11O72-0726-SM-5P9GO 13.5
GTEX-ZA64-1626-SM-5CVME 13.5
GTEX-144GN-1626-SM-5Q5BU 13.4
GTEX-147F4-0626-SM-5LUAK 13.4
GTEX-OIZH-2126-SM-3NB1P 13.4
GTEX-11P82-1526-SM-5BC5M 13.3
GTEX-O5YT-2126-SM-3MJGD 13.3
GTEX-P4QR-0226-SM-3NMCH 13.3
GTEX-ZT9W-2226-SM-57WFU 13.3
GTEX-145MH-2326-SM-5O9AW 13.2
GTEX-OOBK-2126-SM-3LK5T 13.2
GTEX-T8EM-0126-SM-4DM5R 13.2
GTEX-ZZ64-1126-SM-5GZXY 13.2
GTEX-13O1R-0726-SM-5IJEI 13.1
GTEX-RM2N-1326-SM-48FCW 13.1
GTEX-11EQ9-1926-SM-5PNVV 13.0
GTEX-OHPM-2126-SM-3LK75 13.0
GTEX-RN64-2326-SM-48FDW 13.0
GTEX-U8XE-0126-SM-4E3I3 13.0
GTEX-X5EB-2026-SM-4E3KA 13.0
GTEX-ZV7C-2026-SM-5NQ8F 13.0
GTEX-U4B1-1526-SM-4DXSL 12.9
GTEX-UPJH-0126-SM-4IHLL 12.9
GTEX-P4QS-2126-SM-3NMCF 12.8
GTEX-R55C-1426-SM-48FED 12.8
GTEX-U8T8-1126-SM-4DXUE 12.8
GTEX-XBED-2026-SM-4AT5D 12.8
GTEX-132QS-1226-SM-5P9GD 12.7
GTEX-13O61-2026-SM-5J2M6 12.7
GTEX-QMRM-1526-SM-4R1K6 12.7
GTEX-Y9LG-1726-SM-4VBQE 12.7
GTEX-13NZA-2526-SM-5IJFX 12.6
GTEX-144GM-0426-SM-5Q5C8 12.6
GTEX-11DXZ-2126-SM-59881 12.5
GTEX-1399R-1626-SM-5P9GG 12.5
GTEX-Q2AI-1226-SM-48U14 12.5
GTEX-13O21-1226-SM-5J2MK 12.4
GTEX-11NSD-1026-SM-5N9BE 12.3
GTEX-R55D-0126-SM-48FEL 12.3
GTEX-SNOS-1126-SM-4DM67 12.3
GTEX-YEC3-1726-SM-5IFIK 12.3
GTEX-S3XE-1526-SM-4AD5A 12.2
GTEX-13NYB-2226-SM-5MR58 12.1
GTEX-ZAB4-0126-SM-5CVMG 12.1
GTEX-RUSQ-2126-SM-47JXK 12.0
GTEX-11ONC-2226-SM-5HL6D 11.9
GTEX-13NZB-2026-SM-5MR4M 11.9
GTEX-U3ZH-1526-SM-4DXV1 11.9
GTEX-WVLH-2626-SM-4MVNV 11.9
GTEX-X261-2326-SM-4PQYU 11.9
GTEX-1339X-1926-SM-5PNVP 11.7
GTEX-NFK9-0126-SM-3LK5H 11.7
GTEX-QLQW-1026-SM-447A9 11.7
GTEX-U3ZM-1626-SM-4DXSK 11.7
GTEX-ZUA1-2726-SM-59HLJ 11.7
GTEX-X3Y1-2626-SM-4PQZI 11.6
GTEX-Q2AH-1526-SM-48TZG 11.5
GTEX-S4Q7-1226-SM-4AD5I 11.5
GTEX-111YS-2026-SM-5EGGL 11.4
GTEX-13FTW-1326-SM-5LZZD 11.4
GTEX-QV44-1726-SM-4R1KG 11.4
GTEX-S33H-0126-SM-4AD62 11.4
GTEX-XPT6-1626-SM-4B655 11.4
GTEX-VJYA-1426-SM-4KL1Y 11.3
GTEX-XMK1-2026-SM-4B65K 11.2
GTEX-ZT9X-1426-SM-5DUX1 11.2
GTEX-145LT-0426-SM-5LUAP 10.8
GTEX-RWSA-2426-SM-47JXR 10.8
GTEX-WOFM-1126-SM-4OOSB 10.6
GTEX-11P7K-1026-SM-5HL6Y 10.5
GTEX-WZTO-0326-SM-4PQYZ 10.5
GTEX-PLZ5-1526-SM-3P5ZX 10.3
GTEX-1399Q-2826-SM-5IJEZ 10.2
GTEX-11TT1-2226-SM-5GU6B 10.1
GTEX-YB5E-1926-SM-5IFIG 10.0
GTEX-ZDTT-2026-SM-5K7TY 9.7
GTEX-WFON-2026-SM-4LVMW 9.2
GTEX-XPVG-2226-SM-4B65U 9.1
GTEX-11WQK-2826-SM-5EQKH 8.7
Show all

TESTIS - FANTOM5 CAGE

Average Tags Per Million

77.9

FANTOM5 sample id

Sample description

Tags Per Million

Testis
Tags Per Million: 77.9
FF:10096-102C6 14-64 years, male 80.2
FF:10026-101D8 34,53,86 years, male 75.6

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