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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:57.9RPKM
FANTOM5:812.4Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:High
 

Antibody staining

Antibody CAB006831

 

Glial cells

Not detected  

Neuronal cells

High  
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

57.9

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 57.9
Samples: 117

Max RPKM: 122.1
Min RPKM: 9.5
Std RPKM: 27.6
Median RPKM: 59.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 122.1
GTEX-145MH-0011-R5a-SM-5P9JT 112.4
GTEX-13FXS-0011-R5b-SM-5LZYE 111.9
GTEX-13SLX-0011-R5a-SM-5O9BV 107.5
GTEX-13G51-0011-R5a-SM-5L3EB 107.2
GTEX-X585-0011-R5A-SM-46MVI 105.9
GTEX-14BIM-0011-R5b-SM-5S2RM 101.8
GTEX-131YS-0011-R5b-SM-5K7YB 98.5
GTEX-13X6K-0011-R5b-SM-5PNUE 98.5
GTEX-13VXU-0011-R5a-SM-5O9D7 95.2
GTEX-11GSP-0011-R5a-SM-57WBE 94.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 94.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 93.4
GTEX-12WSC-0011-R5b-SM-5CVNS 92.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 92.3
GTEX-13OVL-0011-R5b-SM-5L3FU 92.2
GTEX-1313W-0011-R5b-SM-5L3EP 90.5
GTEX-145LS-0011-R5a-SM-5SI65 90.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 87.6
GTEX-WL46-0011-R5A-SM-3LK6V 86.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 86.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 86.1
GTEX-13X6J-0011-R5b-SM-5PNWT 85.3
GTEX-13S7M-0011-R5b-SM-5P9HS 85.0
GTEX-13OW5-0011-R5b-SM-5L3FR 84.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 81.6
GTEX-WZTO-0011-R5B-SM-3NMC5 80.1
GTEX-1399T-0011-R5b-SM-5IJDK 79.4
GTEX-13FLW-0011-R5a-SM-5LZX6 79.4
GTEX-13O3O-0011-R5b-SM-5KM44 78.0
GTEX-WWYW-0011-R5A-SM-3NB3E 77.3
GTEX-N7MS-0011-R5a-SM-2HMK8 75.6
GTEX-13NYB-0011-R5a-SM-5MR45 75.2
GTEX-13OW7-0011-R5b-SM-5O9DM 75.0
GTEX-QVJO-0011-R5A-SM-2S1QM 74.2
GTEX-13OW6-0011-R5a-SM-5O9BK 73.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 73.4
GTEX-T6MN-0011-R5A-SM-32QPD 72.1
GTEX-14ABY-0011-R5b-SM-5SI7B 72.0
GTEX-N7MT-0011-R5a-SM-2I3G6 71.9
GTEX-WVLH-0011-R5A-SM-3MJFW 71.6
GTEX-RVPV-0011-R5A-SM-2TF69 71.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70.7
GTEX-UTHO-0011-R5A-SM-3GIJD 68.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 68.1
GTEX-S7SE-0011-R5A-SM-2XCDA 66.7
GTEX-13JUV-0011-R5a-SM-5LZY5 66.6
GTEX-ZUA1-0011-R5b-SM-51MTG 65.5
GTEX-11NV4-0011-R5a-SM-5NQ88 64.6
GTEX-ZE7O-0011-R5a-SM-57WBO 64.6
GTEX-12WSD-0011-R5b-SM-5CVNG 64.4
GTEX-11H98-0011-R5b-SM-57WCF 63.2
GTEX-13NYS-0011-R5a-SM-5MR4D 63.1
GTEX-T5JC-0011-R5A-SM-32PLK 62.3
GTEX-132Q8-0011-R5a-SM-5IJDM 61.9
GTEX-13CZV-0011-R5a-SM-5K7XA 61.3
GTEX-RU72-0011-R5A-SM-2TF6U 61.2
GTEX-Z93S-0011-R5b-SM-4RGNI 59.6
GTEX-TSE9-0011-R5A-SM-3DB7J 59.5
GTEX-R55E-0011-R5A-SM-2TC5N 57.6
GTEX-11OF3-0011-R5a-SM-57WB4 56.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 55.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 55.5
GTEX-13OVH-0011-R5b-SM-5KM4L 55.3
GTEX-14BIN-0011-R5b-SM-5SI78 54.9
GTEX-12ZZX-0011-R5a-SM-5HL89 54.4
GTEX-13FLV-0011-R5a-SM-5LZWT 53.3
GTEX-ZXG5-0011-R5b-SM-57WBN 52.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 52.1
GTEX-13X6I-0011-R5a-SM-5PNWW 51.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 50.4
GTEX-OHPN-0011-R5A-SM-2I5FF 50.0
GTEX-XOTO-0011-R5A-SM-4B657 49.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 46.4
GTEX-NL4W-0011-R5a-SM-2I3GD 45.0
GTEX-PVOW-0011-R5A-SM-32PL7 44.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 44.3
GTEX-12WSB-0011-R5b-SM-5GU67 44.1
GTEX-T2IS-0011-R5A-SM-32QP4 44.0
GTEX-P44H-0011-R5A-SM-2XCEX 43.4
GTEX-YFC4-0011-R5a-SM-4RGLR 42.0
GTEX-139TT-0011-R5b-SM-5K7W8 40.7
GTEX-YJ89-0011-R5a-SM-4V6GM 40.7
GTEX-13CIG-0011-R5b-SM-5L3F2 38.4
GTEX-RVPU-0011-R5A-SM-2XCAD 38.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 38.2
GTEX-13JVG-0011-R5a-SM-5MR4O 36.4
GTEX-XMD1-0011-R5A-SM-4AT47 34.9
GTEX-NL3H-0011-R5a-SM-2I3GB 33.6
GTEX-144GO-0011-R5a-SM-5PNUR 32.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 31.4
GTEX-144GL-0011-R5b-SM-5PNUJ 30.9
GTEX-11WQC-0011-R5a-SM-5BC74 30.7
GTEX-13FHP-0011-R5b-SM-5LZY2 30.7
GTEX-13112-0011-R5b-SM-5DUV8 28.8
GTEX-X4XX-0011-R5A-SM-46MWN 27.1
GTEX-X261-0011-R5A-SM-3NMB4 26.2
GTEX-ZV68-0011-R5a-SM-4YCDW 24.3
GTEX-ZVT3-0011-R5a-SM-51MSI 24.0
GTEX-OXRN-0011-R5A-SM-2I5EF 22.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 21.9
GTEX-QMR6-0011-R5A-SM-32PKT 21.2
GTEX-12WSH-0011-R5b-SM-5P9F3 20.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 20.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 19.7
GTEX-139TS-0011-R5b-SM-5J2MZ 19.2
GTEX-1477Z-0011-R5b-SM-5PNUO 18.9
GTEX-1445S-0011-R5a-SM-5PNUS 17.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 17.2
GTEX-11UD1-0011-R5b-SM-5P9FP 15.9
GTEX-13CF2-0011-R5a-SM-5LZWS 14.8
GTEX-145MG-0011-R5b-SM-5S2VU 14.3
GTEX-NPJ7-0011-R5a-SM-33HBK 14.2
GTEX-139T8-0011-R5b-SM-5J1MO 12.6
GTEX-S7PM-0011-R5A-SM-3NM8G 12.3
GTEX-12WSA-0011-R5b-SM-5GU5I 12.0
GTEX-13NZA-0011-R5b-SM-5KM4K 9.5
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

812.4

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 812.4
FF:10379-105H1 89 years, female 993.3
FF:10164-103B2 76 years, female 631.4

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The Human Protein Atlas project is funded
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