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PNMA1
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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:194.0TPM
GTEx:71.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Medium
Neuropil:Not detected
 

Antibody staining

Antibody HPA003817

 

Antibody HPA015007

 

Endothelial cells

Not detected   Not detected  

Glial cells

Not detected   Not detected  

Neuronal cells

High   High  

Neuropil

Not detected   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

194.0

N/A Male, age 5
Sample 1
TPM: 205.1
overview Female, age 40
Sample 2
TPM: 173.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 203.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

71.0

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 68.9
Samples: 114

Max RPKM: 112.4
Min RPKM: 31.1
Std RPKM: 17.8
Median RPKM: 71.8
GTEX-13NYC-2826-SM-5K7WR 112.4
GTEX-X585-3026-SM-46MWF 104.8
GTEX-14BMV-3026-SM-5S2PQ 100.8
GTEX-WHSE-3026-SM-3P5ZH 97.8
GTEX-WWYW-3126-SM-3NB39 97.4
GTEX-WZTO-2926-SM-3NM9I 95.3
GTEX-145MH-3026-SM-5Q5DZ 94.1
GTEX-PVOW-2526-SM-2XCF7 93.6
GTEX-RNOR-2326-SM-2TF4I 93.3
GTEX-T5JC-2426-SM-3NMDB 93.2
GTEX-13NYS-3126-SM-5KLYV 92.6
GTEX-WVLH-3026-SM-3MJG9 90.8
GTEX-14ASI-3026-SM-5S2PN 90.5
GTEX-13OW6-3026-SM-5J2MI 88.5
GTEX-T2IS-3026-SM-32QPM 88.4
GTEX-WL46-2926-SM-3LK82 88.2
GTEX-QVJO-1426-SM-2S1QY 87.6
GTEX-11PRG-2926-SM-5987A 87.5
GTEX-11DXY-3226-SM-5GIDE 87.0
GTEX-13FXS-3126-SM-5J2NN 86.0
GTEX-11NUK-2926-SM-5A5MD 84.9
GTEX-1313W-3126-SM-5LZUI 84.8
GTEX-13FHO-3026-SM-5J1O9 84.4
GTEX-ZUA1-3026-SM-59HJC 84.4
GTEX-XLM4-3026-SM-4AT6L 83.9
GTEX-QMR6-1426-SM-32PLA 83.5
GTEX-11ZUS-2926-SM-5FQSL 82.7
GTEX-YFC4-3126-SM-5PNV6 82.7
GTEX-13FLW-1426-SM-5K7YE 82.5
GTEX-131YS-3126-SM-5KLYT 82.4
GTEX-T6MN-2626-SM-32PMQ 81.9
GTEX-ZAK1-3026-SM-5S2MJ 81.8
GTEX-12ZZX-2926-SM-5GCOQ 81.6
GTEX-ZYFD-3026-SM-5E44C 81.2
GTEX-13OVH-3026-SM-5MR4N 81.1
GTEX-13O3Q-2926-SM-5KM45 80.9
GTEX-13SLX-3126-SM-5S2Q5 80.3
GTEX-144FL-3026-SM-5O99C 80.2
GTEX-12126-1026-SM-5P9JJ 79.8
GTEX-13VXU-2926-SM-5LU5C 78.4
GTEX-X4XX-3026-SM-3NMB2 77.0
GTEX-12WSC-3026-SM-5GCNF 76.9
GTEX-Y8DK-0826-SM-4TT3T 76.9
GTEX-TSE9-3026-SM-3DB76 75.6
GTEX-132Q8-3026-SM-5PNVG 75.5
GTEX-NPJ8-1526-SM-2D7VU 75.1
GTEX-11GSO-2926-SM-5HL73 75.0
GTEX-144GL-3026-SM-5Q5CW 74.1
GTEX-12ZZY-3026-SM-5GCOU 73.9
GTEX-UTHO-3026-SM-3GAFB 73.3
GTEX-111FC-3126-SM-5GZZ2 72.8
GTEX-1192X-3126-SM-5N9BY 72.7
GTEX-145MF-2726-SM-5O995 72.4
GTEX-117XS-3026-SM-5N9CA 72.2
GTEX-13NYB-3026-SM-5IJD7 72.2
GTEX-R55F-1326-SM-5S2V4 72.2
GTEX-Q2AG-2926-SM-2HMJ3 71.8
GTEX-ZZPT-3026-SM-5GZXH 71.7
GTEX-YJ89-3026-SM-5IFJI 71.5
GTEX-12ZZZ-3026-SM-5BC67 69.8
GTEX-1399T-3026-SM-5KLZC 69.8
GTEX-11DXW-1126-SM-5H12Q 69.4
GTEX-12WSH-3026-SM-5CVNI 68.8
GTEX-XOTO-3026-SM-4B65M 68.1
GTEX-Z93S-2926-SM-57WB9 68.1
GTEX-11OC5-0726-SM-5P9JK 67.8
GTEX-QVUS-2826-SM-3GADB 67.1
GTEX-13PL6-3126-SM-5LUAR 65.7
GTEX-13QIC-2926-SM-5J2NF 65.5
GTEX-145MG-3026-SM-5RQJA 65.2
GTEX-Y111-2726-SM-4TT3N 65.0
GTEX-145LS-3126-SM-5Q5BY 64.8
GTEX-13FHP-3026-SM-5IJBS 63.3
GTEX-OXRN-2426-SM-2I5EQ 62.3
GTEX-ZVT3-3026-SM-5E43N 61.0
GTEX-13X6J-3026-SM-5Q5CU 60.6
GTEX-RU72-3026-SM-5SI7Y 60.3
GTEX-11ONC-2926-SM-5P9JM 60.1
GTEX-1128S-2726-SM-5H12C 58.9
GTEX-13OW8-2826-SM-5L3GC 58.4
GTEX-14A5I-2926-SM-5Q5CQ 57.7
GTEX-QDT8-2926-SM-32PKC 54.5
GTEX-ZE7O-3126-SM-5HL5X 54.2
GTEX-13O3O-3126-SM-5KM3H 53.5
GTEX-11EI6-3026-SM-5GZZO 53.1
GTEX-11O72-2926-SM-5BC4V 53.0
GTEX-ZAJG-3126-SM-5HL9J 52.4
GTEX-13X6K-2926-SM-5Q5D5 51.7
GTEX-12ZZW-2926-SM-5LZUP 51.6
GTEX-139T8-1026-SM-5J2MC 51.4
GTEX-13S7M-3126-SM-5RQJQ 51.4
GTEX-NPJ7-2726-SM-2I3FT 51.3
GTEX-13JUV-2926-SM-5LZX7 51.2
GTEX-11GS4-3126-SM-5A5LH 51.0
GTEX-13OW7-3026-SM-5L3GY 49.7
GTEX-13OVJ-2826-SM-5L3GW 48.9
GTEX-11EMC-3226-SM-5EGKW 47.1
GTEX-131XW-3126-SM-5LZUC 47.0
GTEX-11NV4-2126-SM-5N9DS 45.4
GTEX-12WSD-3126-SM-5HL7P 45.1
GTEX-11TTK-2926-SM-5PNYP 44.8
GTEX-13JVG-3126-SM-5L3FH 44.8
GTEX-13IVO-2926-SM-5L3CZ 44.2
GTEX-11OF3-2926-SM-5HL78 42.8
GTEX-13G51-3026-SM-5IJB8 42.5
GTEX-11WQK-3026-SM-5EQL6 41.6
GTEX-11GSP-3226-SM-5986O 40.8
GTEX-147GR-3026-SM-5S2ML 40.7
GTEX-1117F-3226-SM-5N9CT 40.4
GTEX-N7MT-1126-SM-5SI7V 39.1
GTEX-PWO3-0926-SM-2I5EY 38.0
GTEX-13PVQ-3026-SM-5SI93 37.8
GTEX-1445S-3026-SM-5O9BR 32.0
GTEX-12WSA-2926-SM-5EQ4D 31.1
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 73.3
Samples: 108

Max RPKM: 131.5
Min RPKM: 23.2
Std RPKM: 23.9
Median RPKM: 75.2
GTEX-X585-0011-R10A-SM-46MUY 131.5
GTEX-NL3H-0011-R10A-SM-2I3E9 120.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 117.8
GTEX-T6MN-0011-R10A-SM-32QP7 109.3
GTEX-T5JC-0011-R10A-SM-32PM2 109.1
GTEX-13NYS-0011-R10a-SM-5MR4S 107.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 107.4
GTEX-1313W-0011-R10b-SM-5DUXA 105.5
GTEX-WWYW-0011-R10A-SM-3NB35 104.8
GTEX-145MH-0011-R10b-SM-5PNUK 104.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 104.1
GTEX-WVLH-0011-R10A-SM-3MJFM 103.2
GTEX-131XH-0011-R10a-SM-5EGLJ 102.7
GTEX-13O3Q-0011-R10b-SM-5KM39 102.6
GTEX-12ZZX-0011-R10b-SM-5DUWK 102.5
GTEX-14ASI-0011-R10b-SM-5S2VZ 100.9
GTEX-S7SE-0011-R10A-SM-2XCDF 97.3
GTEX-WL46-0011-R10A-SM-3MJFQ 97.0
GTEX-WZTO-0011-R10B-SM-4E3KB 97.0
GTEX-12WSE-0011-R10b-SM-5P9JV 96.4
GTEX-Y8DK-0011-R10A-SM-4SOK1 95.4
GTEX-XLM4-0011-R10A-SM-4AT5P 94.5
GTEX-12WSF-0011-R10a-SM-5LZVH 94.2
GTEX-13X6J-0011-R10b-SM-5PNWA 93.4
GTEX-N7MS-0011-R10A-SM-2HMJK 93.4
GTEX-YFC4-0011-R10a-SM-4SOK5 93.0
GTEX-131YS-0011-R10b-SM-5EQ5N 92.9
GTEX-145MG-0011-R10a-SM-5PNWG 91.5
GTEX-YJ89-0011-R10a-SM-4SOK9 91.3
GTEX-ZF28-0011-R10a-SM-4WWEH 91.0
GTEX-QMR6-0011-R10A-SM-32PKO 89.2
GTEX-13NYB-0011-R10a-SM-5KM43 87.7
GTEX-12WSM-0011-R10a-SM-5DUWV 87.6
GTEX-NPJ8-0011-R10A-SM-2YUMO 87.3
GTEX-13SLX-0011-R10a-SM-5P9HV 86.8
GTEX-12WSC-0011-R10a-SM-5GU57 86.2
GTEX-13X6K-0011-R10a-SM-5P9JR 85.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 85.1
GTEX-13FHO-0011-R10b-SM-5J2MM 83.0
GTEX-X4XX-0011-R10B-SM-46MWO 82.5
GTEX-ZVZQ-0011-R10b-SM-51MRT 81.8
GTEX-13QIC-0011-R10a-SM-5O9C7 80.7
GTEX-13FXS-0011-R10a-SM-5J2MA 80.5
GTEX-QVUS-0011-R10A-SM-3GIK3 80.2
GTEX-X4EP-0011-R10B-SM-4QASJ 79.5
GTEX-13S7M-0011-R10b-SM-5PNZB 79.3
GTEX-12WSH-0011-R10a-SM-5LZUS 79.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC 78.5
GTEX-11H98-0011-R10b-SM-5NQ98 77.8
GTEX-13FLW-0011-R10b-SM-5LZZF 77.7
GTEX-147GR-0011-R10b-SM-5S2UM 77.5
GTEX-NPJ7-0011-R10A-SM-2I3E5 76.1
GTEX-N7MT-0011-R10A-SM-2I3E1 75.6
GTEX-QDT8-0011-R10A-SM-32PKG 75.4
GTEX-13OVL-0011-R10a-SM-5L3GS 75.1
GTEX-14BIN-0011-R10a-SM-5S2UA 74.8
GTEX-13OW6-0011-R10a-SM-5L3HE 74.5
GTEX-Z93S-0011-R10a-SM-4RGNM 73.3
GTEX-14BIL-0011-R10a-SM-5SI75 73.2
GTEX-13OW7-0011-R10a-SM-5L3H3 73.1
GTEX-13RTJ-0011-R10b-SM-5O9CW 72.2
GTEX-ZUA1-0011-R10a-SM-51MT6 71.9
GTEX-13QJC-0011-R10a-SM-5SI63 71.3
GTEX-13JUV-0011-R10b-SM-5LZXR 70.4
GTEX-13N2G-0011-R10a-SM-5MR34 69.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 69.4
GTEX-12126-0011-R10b-SM-5BC6T 69.2
GTEX-13N1W-0011-R10b-SM-5MR4H 69.0
GTEX-NL4W-0011-R10A-SM-2I3DY 69.0
GTEX-13G51-0011-R10b-SM-5LZYF 65.7
GTEX-P44H-0011-R10A-SM-2XCEK 64.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 63.9
GTEX-13CZV-0011-R10b-SM-5LZYD 62.5
GTEX-145LS-0011-R10a-SM-5PNUQ 62.2
GTEX-13X6I-0011-R10a-SM-5PNWI 61.8
GTEX-OXRN-0011-R10A-SM-2I5GC 60.4
GTEX-13OW8-0011-R10a-SM-5L3H6 58.8
GTEX-147F4-0011-R10b-SM-5S2WC 58.8
GTEX-13OVJ-0011-R10b-SM-5L3HT 56.9
GTEX-11ZUS-0011-R10b-SM-5BC79 55.9
GTEX-TSE9-0011-R10A-SM-3DB7O 55.4
GTEX-12WSD-0011-R10b-SM-5GU79 54.5
GTEX-145LU-0011-R10a-SM-5PNWJ 54.5
GTEX-ZVT3-0011-R10b-SM-57WB6 54.2
GTEX-13FLV-0011-R10b-SM-5LZZ2 52.3
GTEX-X261-0011-R10B-SM-4E3JT 51.7
GTEX-13O3O-0011-R10a-SM-5LUA9 51.5
GTEX-13SLW-0011-R10a-SM-5S2UI 50.1
GTEX-139TS-0011-R10a-SM-5K7TU 48.6
GTEX-OXRO-0011-R10A-SM-2I5EH 46.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 44.3
GTEX-11WQC-0011-R10a-SM-57WCT 42.2
GTEX-1445S-0011-R10a-SM-5PNWB 39.9
GTEX-ZXG5-0011-R10a-SM-57WDD 39.8
GTEX-11WQK-0011-R10a-SM-5BC6R 39.0
GTEX-12ZZW-0011-R10b-SM-5HL9X 38.4
GTEX-11GSP-0011-R10a-SM-5NQ7J 37.9
GTEX-ZV68-0011-R10a-SM-51MT7 37.9
GTEX-RVPU-0011-R10A-SM-2XCAH 37.5
GTEX-XMD1-0011-R10A-SM-4AT4A 37.0
GTEX-13NZA-0011-R10b-SM-5KM54 35.2
GTEX-13JVG-0011-R10b-SM-5KM2P 32.3
GTEX-12WSA-0011-R10b-SM-5P9ET 32.0
GTEX-1477Z-0011-R10b-SM-5S2RF 31.2
GTEX-13IVO-0011-R10a-SM-5LZY3 30.8
GTEX-14753-0011-R10b-SM-5S2WE 30.2
GTEX-ZE7O-0011-R10a-SM-57WAZ 25.7
GTEX-131XW-0011-R10a-SM-5DUVA 23.2
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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