We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
IMPDH2
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:25.8TPM
GTEx:25.2RPKM
FANTOM5:78.9Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Medium
Hepatocytes:Medium
 

Antibody staining

Antibody HPA001400

 

Antibody CAB020717

 

Bile duct cells

Low   Medium  

Hepatocytes

Not detected   Medium  
   
   
   

LIVER - HPA RNA-seq

Average TPM

25.8

N/A Female, age 60
Sample 1
TPM: 21.2
overview Male, age 54
Sample 2
TPM: 22.5
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 22.1
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 17.1
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 22.9
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 32.5
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 27.3
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 28.6
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 22.4
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 41.7
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

25.2

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 25.2
Samples: 119

Max RPKM: 66.2
Min RPKM: 8.5
Std RPKM: 10.5
Median RPKM: 22.1
GTEX-12696-0826-SM-5EGGE 66.2
GTEX-ZTPG-1426-SM-51MT3 61.7
GTEX-S32W-1926-SM-4AD63 55.4
GTEX-13NZ9-1326-SM-5MR3V 51.9
GTEX-QDVN-0826-SM-48TZ2 49.9
GTEX-X4XY-1626-SM-46MVN 49.2
GTEX-YB5E-0326-SM-5IFHU 44.8
GTEX-13N11-0926-SM-5IJG2 43.8
GTEX-14C38-1526-SM-5RQJ7 43.0
GTEX-REY6-1226-SM-48FDR 42.0
GTEX-YFC4-1526-SM-5IFJS 42.0
GTEX-Y5LM-0426-SM-4VBRO 40.4
GTEX-UTHO-2426-SM-4JBHD 39.5
GTEX-131XE-0326-SM-5LZVO 37.7
GTEX-13NYB-1026-SM-5IFH3 37.4
GTEX-12WSG-0626-SM-5FQTQ 36.2
GTEX-X4EO-1126-SM-4QARQ 35.7
GTEX-144GM-1326-SM-5LU5E 35.3
GTEX-UPIC-0926-SM-4IHLV 35.1
GTEX-146FH-1526-SM-5NQBU 34.8
GTEX-QEG4-1826-SM-4R1JN 34.6
GTEX-QEL4-1226-SM-447A4 34.2
GTEX-1497J-0726-SM-5Q5D1 32.7
GTEX-145MF-0826-SM-5QGQA 32.3
GTEX-147F4-1426-SM-5LUA8 32.0
GTEX-QESD-2026-SM-447BI 31.6
GTEX-RN64-1826-SM-48FDV 30.8
GTEX-ZYY3-0626-SM-5NQ6W 30.8
GTEX-RWSA-1426-SM-47JXA 30.6
GTEX-13PVR-0126-SM-5S2PY 30.5
GTEX-YEC4-0826-SM-5P9FV 30.3
GTEX-131YS-1626-SM-5HL6C 29.6
GTEX-ZAB4-0826-SM-5LU9D 29.3
GTEX-ZVT4-0626-SM-5E45T 29.3
GTEX-Q734-0326-SM-48U15 29.2
GTEX-12WSL-0226-SM-5CVMJ 28.4
GTEX-12WSI-0226-SM-5GCNA 28.3
GTEX-13O3O-1826-SM-5IFGW 26.3
GTEX-11ZUS-2526-SM-59872 26.0
GTEX-SJXC-1226-SM-4DM78 25.8
GTEX-ZPU1-0826-SM-57WG2 25.4
GTEX-139YR-0226-SM-5IFEM 25.1
GTEX-11ZTS-1426-SM-5EQMM 25.0
GTEX-131XH-0626-SM-5LZWH 24.5
GTEX-X4EP-1026-SM-4QAS5 24.4
GTEX-VUSG-0126-SM-4KL1X 24.2
GTEX-13112-1426-SM-5EGH8 24.1
GTEX-RTLS-1326-SM-46MUN 24.1
GTEX-R53T-0326-SM-48FEC 24.0
GTEX-11NUK-1226-SM-5P9GM 23.9
GTEX-P78B-1326-SM-3P611 23.7
GTEX-139TU-0826-SM-5IJFG 23.3
GTEX-145MO-2326-SM-5NQ9K 23.3
GTEX-13OW6-2626-SM-5IFF2 23.2
GTEX-RNOR-1426-SM-48FDJ 22.6
GTEX-WQUQ-1926-SM-4OOSA 22.5
GTEX-11DXY-0526-SM-5EGGQ 22.4
GTEX-13VXU-0926-SM-5IFFH 22.4
GTEX-ZZPU-0426-SM-5GZYH 22.3
GTEX-13N2G-0926-SM-5IFGJ 22.1
GTEX-13113-1326-SM-5GCOI 22.0
GTEX-WZTO-0626-SM-4PQYY 22.0
GTEX-T6MN-1226-SM-3NMA5 21.9
GTEX-XOTO-0826-SM-4B65O 21.9
GTEX-ZVT3-1626-SM-5GU66 21.5
GTEX-ZF29-2026-SM-4WWB7 21.3
GTEX-13SLX-1226-SM-5S2Q6 21.2
GTEX-ZYT6-0626-SM-5E45V 21.0
GTEX-X261-1726-SM-4PQYT 20.9
GTEX-1212Z-0226-SM-59HLF 20.7
GTEX-13FLV-0326-SM-5N9DJ 20.7
GTEX-11ZVC-0726-SM-5FQT9 20.2
GTEX-13FTW-1126-SM-5J2NV 20.1
GTEX-12WSD-1426-SM-5GCN9 20.0
GTEX-132NY-0926-SM-5P9G3 20.0
GTEX-S4Z8-0526-SM-4AD4T 19.9
GTEX-11EQ9-0526-SM-5A5JZ 19.8
GTEX-11GSP-0626-SM-5986T 19.8
GTEX-13FTZ-0726-SM-5IFFY 19.8
GTEX-YECK-1926-SM-4W21H 19.8
GTEX-TKQ2-1726-SM-4DXUP 19.7
GTEX-11OF3-0726-SM-5BC4Z 19.5
GTEX-12WSM-0726-SM-5GCOW 19.5
GTEX-14A5I-1726-SM-5QGQ5 19.4
GTEX-U3ZN-0226-SM-3DB8D 19.3
GTEX-ZVP2-0626-SM-51MSO 18.9
GTEX-1399T-0826-SM-5IFES 18.6
GTEX-14AS3-0126-SM-5Q5F4 18.6
GTEX-11DXZ-0126-SM-5EGGY 18.5
GTEX-147JS-1126-SM-5RQIW 18.3
GTEX-WYVS-1926-SM-4PQZ2 18.1
GTEX-12KS4-1326-SM-5LUB3 18.0
GTEX-11NV4-1326-SM-5HL6V 17.8
GTEX-S33H-1626-SM-4AD68 17.8
GTEX-PX3G-0826-SM-48TZS 17.6
GTEX-RU72-1426-SM-46MUF 17.6
GTEX-13QJC-0726-SM-5RQJK 17.2
GTEX-14DAQ-1726-SM-5S2R2 16.9
GTEX-Y5V5-0926-SM-4VBPZ 16.9
GTEX-XBEC-1526-SM-4AT68 16.8
GTEX-14753-1626-SM-5NQ9L 16.3
GTEX-14E1K-0326-SM-5S2PE 16.1
GTEX-145LU-1326-SM-5LU9N 15.9
GTEX-RM2N-1926-SM-48FCU 15.8
GTEX-1269C-0626-SM-5FQSS 15.4
GTEX-11WQC-0726-SM-5EQMR 15.3
GTEX-139TS-1426-SM-5IFJD 14.9
GTEX-X3Y1-2726-SM-4PQZH 14.6
GTEX-ZAB5-0426-SM-5CVMI 14.6
GTEX-QV44-0326-SM-4R1KD 14.4
GTEX-ZF2S-3026-SM-4WWCH 14.1
GTEX-WFON-1726-SM-4LVMQ 13.6
GTEX-Q2AG-1126-SM-48U1P 13.5
GTEX-13NZB-0626-SM-5IFH6 12.9
GTEX-1399R-1226-SM-5P9GF 12.4
GTEX-Z9EW-0426-SM-5CVM9 12.2
GTEX-OOBJ-0826-SM-3NB2K 12.0
GTEX-UPK5-1426-SM-4JBHH 12.0
GTEX-12ZZZ-1326-SM-59HKW 8.5
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

78.9

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 78.9
FF:10018-101C9 64,69,70 years, mixed 78.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.