We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
IMPDH2
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:77.1TPM
GTEx:56.2RPKM
FANTOM5:77.2Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA001400

 

Antibody CAB020717

 

Glandular cells

Medium   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

77.1

overview Male, age 65
Sample 1
TPM: 94.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 58.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 77.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 77.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

56.2

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 56.2
Samples: 88

Max RPKM: 135.7
Min RPKM: 18.8
Std RPKM: 19.3
Median RPKM: 53.9
GTEX-WFG8-1626-SM-4LVMB 135.7
GTEX-ZTPG-2626-SM-57WFX 102.1
GTEX-Y5LM-1626-SM-4VDTB 98.3
GTEX-UPK5-2026-SM-4JBIM 93.0
GTEX-ZYWO-1526-SM-5SIAL 90.9
GTEX-1192X-2526-SM-59868 86.1
GTEX-131XG-1726-SM-5LZUR 86.0
GTEX-13RTK-0826-SM-5Q5C6 85.3
GTEX-ZP4G-1626-SM-57WGD 80.4
GTEX-VUSG-1726-SM-4KKZL 77.7
GTEX-XGQ4-1326-SM-4GIDU 77.6
GTEX-139YR-2226-SM-5IFFW 76.3
GTEX-ZC5H-2326-SM-4WAYT 75.6
GTEX-VJYA-0926-SM-4KL1N 74.0
GTEX-11NSD-1726-SM-5N9C3 72.5
GTEX-WRHK-1026-SM-4MVOD 71.0
GTEX-133LE-1426-SM-5IFH1 70.8
GTEX-11P82-0826-SM-5P9GU 68.9
GTEX-X15G-1426-SM-4PQZK 68.1
GTEX-Z9EW-0926-SM-5CVMM 66.6
GTEX-11XUK-1426-SM-5EQMG 66.5
GTEX-Y3IK-1726-SM-4YCCR 66.5
GTEX-111CU-1326-SM-5NQ8L 66.4
GTEX-148VJ-2226-SM-5NQ9M 66.0
GTEX-117YX-0326-SM-5GICL 65.5
GTEX-ZEX8-1826-SM-57WBH 64.2
GTEX-XXEK-1026-SM-4BRUW 62.0
GTEX-13111-1426-SM-5DUW3 61.8
GTEX-145ME-0926-SM-5O9AR 61.8
GTEX-ZQG8-2526-SM-57WEQ 60.7
GTEX-1399U-2126-SM-5IFEZ 60.2
GTEX-XMK1-1826-SM-4B66F 59.9
GTEX-ZPIC-2326-SM-57WDW 59.6
GTEX-WH7G-1626-SM-4LVMY 59.3
GTEX-12WSK-1526-SM-5CVNO 59.1
GTEX-13QBU-1926-SM-5IJEW 57.8
GTEX-139T6-1026-SM-5IJGC 57.7
GTEX-ZVT2-2126-SM-5NQ93 57.3
GTEX-ZF2S-1726-SM-57WFT 56.3
GTEX-13OVI-1926-SM-5IJCG 56.3
GTEX-13O61-1326-SM-5KM31 55.5
GTEX-ZVP2-1726-SM-5GU5P 55.1
GTEX-13O21-1026-SM-5IJDU 54.4
GTEX-ZA64-1226-SM-5HL7B 53.9
GTEX-ZYFG-2026-SM-5E43Y 53.9
GTEX-11DXZ-1326-SM-5H11X 53.5
GTEX-XAJ8-0526-SM-47JYK 53.1
GTEX-1399R-2026-SM-5K7WN 52.9
GTEX-WFG7-1726-SM-4LVME 52.7
GTEX-11VI4-1626-SM-5EQKO 52.6
GTEX-WFJO-0926-SM-4LVM2 52.5
GTEX-14E6E-1626-SM-5RQI7 52.3
GTEX-13113-1226-SM-5EGHT 52.3
GTEX-13CF3-1226-SM-5LZXN 51.8
GTEX-XBED-1426-SM-4AT4G 51.5
GTEX-ZLFU-1526-SM-4WWBT 50.4
GTEX-13FH7-1226-SM-5IJFK 49.3
GTEX-131XF-1326-SM-5GCMQ 49.2
GTEX-WEY5-1526-SM-4LMJF 48.3
GTEX-13FTW-2026-SM-5IJE2 47.4
GTEX-WQUQ-2426-SM-4MVNW 47.3
GTEX-ZQUD-0926-SM-57WE3 44.9
GTEX-XUZC-1426-SM-4BRV3 44.2
GTEX-ZXES-1526-SM-5NQ95 43.5
GTEX-145LT-1026-SM-5LU9O 43.5
GTEX-11EQ9-1326-SM-5985X 42.6
GTEX-13PL7-2626-SM-5IFH4 42.5
GTEX-11P7K-1626-SM-5GU63 41.9
GTEX-12BJ1-1926-SM-5HL9Z 41.6
GTEX-ZZ64-0526-SM-5GZXM 40.7
GTEX-X5EB-1626-SM-4E3IV 40.7
GTEX-14DAR-1426-SM-5RQIR 39.8
GTEX-11DXX-1626-SM-5H11H 39.7
GTEX-1399S-2026-SM-5KM4B 38.8
GTEX-11I78-1126-SM-5A5K5 38.4
GTEX-Y114-1426-SM-4TT6W 38.1
GTEX-ZLV1-1126-SM-4WWBW 37.9
GTEX-YB5E-1526-SM-5IFIE 36.2
GTEX-ZTX8-0526-SM-59HLD 35.4
GTEX-13D11-0726-SM-5LZZB 33.8
GTEX-Y9LG-1626-SM-5IFHM 33.4
GTEX-ZPCL-1726-SM-57WEO 29.4
GTEX-ZVZP-1826-SM-5GZXB 28.6
GTEX-YF7O-1826-SM-5IFIU 28.5
GTEX-YEC4-1726-SM-4W21E 26.4
GTEX-1122O-1326-SM-5H11F 24.2
GTEX-ZTSS-0926-SM-59865 19.7
GTEX-111YS-1426-SM-5GID8 18.8
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

77.2

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 77.2
FF:10024-101D6 15,40,85 years, mixed 77.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.