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TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:64.6TPM
GTEx:59.0RPKM
FANTOM5:78.9Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Low
Cells in white pulp:Medium
 

Antibody staining

Antibody HPA001400

 

Antibody CAB020717

 

Cells in red pulp

Medium   Low  

Cells in white pulp

Medium   Medium  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

64.6

overview Female, age 60
Sample 1
TPM: 68.2
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 60.2
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 60.5
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 63.2
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 71.1
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

59.0

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 59.0
Samples: 104

Max RPKM: 121.2
Min RPKM: 35.8
Std RPKM: 14
Median RPKM: 56.7
GTEX-ZYWO-0226-SM-5GZX3 121.2
GTEX-XXEK-0126-SM-4BRVU 98.0
GTEX-O5YT-0926-SM-48TDG 96.6
GTEX-11XUK-0426-SM-5EQML 93.3
GTEX-RUSQ-0126-SM-47JWV 88.7
GTEX-ZP4G-0326-SM-4YCEF 87.6
GTEX-13N11-0126-SM-5KM2Z 85.8
GTEX-XUJ4-0226-SM-4BOP8 78.3
GTEX-13FH7-1326-SM-5IFG8 77.6
GTEX-12WSJ-0526-SM-5GCOZ 75.5
GTEX-R55G-0226-SM-48FEI 75.4
GTEX-Y5LM-0326-SM-4VBRN 74.5
GTEX-QLQW-0126-SM-447BK 73.0
GTEX-Q2AH-0226-SM-48U1I 72.8
GTEX-146FR-1926-SM-5NQA6 70.4
GTEX-QDVN-0526-SM-48TZ4 69.9
GTEX-11NSD-0426-SM-5N9CR 69.8
GTEX-U3ZH-0126-SM-4DXUK 68.7
GTEX-XMK1-0126-SM-4B65F 68.7
GTEX-131XE-1126-SM-5EGHW 68.4
GTEX-14E6E-1226-SM-5S2R5 67.2
GTEX-QMRM-0226-SM-4R1K7 66.8
GTEX-QCQG-0226-SM-48U28 66.7
GTEX-13CF3-0226-SM-5J1NW 65.6
GTEX-1399S-0226-SM-5IFFG 65.3
GTEX-ZLFU-0526-SM-4WWBN 64.9
GTEX-146FQ-0626-SM-5LU9U 64.8
GTEX-QV31-0126-SM-447BP 64.5
GTEX-11P81-1326-SM-5GU5S 64.3
GTEX-12WSK-0126-SM-5GCO7 64.1
GTEX-U4B1-0526-SM-4DXTK 63.7
GTEX-144GN-2126-SM-5O99D 63.5
GTEX-OIZH-0926-SM-48TBR 63.0
GTEX-YB5E-0426-SM-5IFHR 63.0
GTEX-WHWD-0126-SM-4OORS 62.8
GTEX-13X6H-0726-SM-5Q5BX 62.7
GTEX-11DXX-0726-SM-5H12X 62.5
GTEX-OOBJ-0926-SM-48TDO 62.5
GTEX-XQ8I-1726-SM-4BOQB 62.4
GTEX-ZYFG-0726-SM-5GIDX 62.4
GTEX-S3XE-0626-SM-4AD6B 61.4
GTEX-PX3G-0926-SM-48U12 61.2
GTEX-ZVP2-0526-SM-51MSC 59.9
GTEX-XPVG-0626-SM-4B65B 59.5
GTEX-12WSG-0926-SM-5EGIH 59.4
GTEX-14DAR-0326-SM-5S2PS 59.4
GTEX-T5JW-0126-SM-4DM6K 59.1
GTEX-XGQ4-0126-SM-4AT4H 58.9
GTEX-11VI4-0126-SM-5GU6Z 57.8
GTEX-XAJ8-0126-SM-47JYG 57.3
GTEX-XV7Q-0126-SM-4BRVK 57.2
GTEX-12BJ1-0726-SM-5EGGF 56.8
GTEX-ZLWG-0426-SM-4WWFA 56.6
GTEX-12WSN-0126-SM-5DUX5 56.2
GTEX-P4PP-0926-SM-48TBZ 55.6
GTEX-POMQ-0126-SM-48TD6 55.5
GTEX-U3ZN-0126-SM-4DXUM 55.1
GTEX-Y8LW-0126-SM-4VBS1 55.1
GTEX-13VXT-1326-SM-5LU3Y 54.7
GTEX-X585-1826-SM-4QAS3 54.4
GTEX-132QS-0226-SM-5IFFZ 54.1
GTEX-147F3-0126-SM-5NQBJ 54.0
GTEX-P4QS-0926-SM-48TBS 53.4
GTEX-13PVR-0326-SM-5RQJY 53.1
GTEX-ZAB5-0526-SM-5CVMU 52.7
GTEX-WFON-0126-SM-4LVM9 51.5
GTEX-QV44-0126-SM-4R1KH 51.2
GTEX-YFCO-0926-SM-5LUA5 50.6
GTEX-1211K-0426-SM-5FQTP 50.4
GTEX-145MN-0126-SM-5RQHY 50.4
GTEX-S4Z8-0226-SM-4AD5K 49.8
GTEX-ZVZP-0726-SM-59HKA 49.8
GTEX-117YX-2126-SM-5GIEL 49.7
GTEX-Y3IK-0126-SM-4WWE9 49.7
GTEX-139T6-0226-SM-5IFGZ 49.6
GTEX-131XG-0426-SM-5IFGD 49.5
GTEX-13PL7-1126-SM-5MR5O 49.5
GTEX-ZV6S-0826-SM-5NQ6Z 49.5
GTEX-1399R-0226-SM-5IJGG 49.4
GTEX-UPK5-1626-SM-4JBHI 49.4
GTEX-Y3I4-0126-SM-4TT26 49.4
GTEX-X4LF-0226-SM-4QAS8 49.3
GTEX-11LCK-0126-SM-5A5M5 49.1
GTEX-X3Y1-0126-SM-4PQZA 48.8
GTEX-UJHI-0126-SM-4IHLP 48.3
GTEX-13U4I-1626-SM-5IFFR 48.2
GTEX-ZPU1-1026-SM-4YCEQ 47.3
GTEX-W5WG-0626-SM-4SOID 46.7
GTEX-VJYA-0126-SM-4KL1P 46.3
GTEX-11EQ9-0426-SM-5A5JY 46.1
GTEX-YB5K-1926-SM-4VDT4 46.1
GTEX-13S86-0126-SM-5S2PI 45.3
GTEX-Z9EW-0726-SM-5HL9H 45.1
GTEX-139YR-0426-SM-5IFFV 44.9
GTEX-1122O-0526-SM-5N9DM 44.6
GTEX-ZZPU-0126-SM-5E446 43.6
GTEX-11P7K-0426-SM-5BC5H 43.0
GTEX-PLZ6-0126-SM-48TC6 42.4
GTEX-ZDTT-1026-SM-5KM19 41.9
GTEX-PW2O-0126-SM-48TC8 41.6
GTEX-Q734-0226-SM-48U1A 38.9
GTEX-YEC4-0126-SM-4W21T 37.6
GTEX-13111-0126-SM-5EGHO 37.3
GTEX-Y114-0726-SM-4TT6U 35.8
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

78.9

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 78.9
FF:10025-101D7 39,50,70 years, male 78.9

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