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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:52.2RPKM
FANTOM5:107.5Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Medium
 

Antibody staining

Antibody HPA035376

 

Antibody HPA035377

 

Glial cells

Low   Low  

Neuronal cells

Medium   Medium  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

52.2

GTEx sample id

RPKM

39.752.060.819.587.20102030405060708090
 
39.752.060.819.587.20102030405060708090

Brain - Hippocampus

Brain - Hippocampus
RPKM: 52.2
Samples: 94

Max RPKM: 99.7
Min RPKM: 19.5
Std RPKM: 15.6
Median RPKM: 52
GTEX-144GL-0011-R1a-SM-5PNZ5 99.7
GTEX-13FXS-0011-R1a-SM-5K7U6 93.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 87.2
GTEX-13OW5-0011-R1b-SM-5L3GE 81.4
GTEX-X585-0011-R1B-SM-46MVE 77.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 77.0
GTEX-13N1W-0011-R1b-SM-5MR4T 73.7
GTEX-13N2G-0011-R1b-SM-5MR3G 73.4
GTEX-N7MS-0011-R1a-SM-2HMJG 70.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 69.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 68.0
GTEX-13JUV-0011-R1a-SM-5LZY4 67.3
GTEX-13OVL-0011-R1a-SM-5L3H5 67.0
GTEX-1399T-0011-R1b-SM-5DUWN 67.0
GTEX-XOTO-0011-R1B-SM-4B65C 66.8
GTEX-12WSE-0011-R1b-SM-5GU4V 66.5
GTEX-139TT-0011-R1a-SM-5LZVD 66.0
GTEX-N7MT-0011-R1a-SM-5SI7S 65.9
GTEX-13G51-0011-R1a-SM-5LZYR 65.8
GTEX-WL46-0011-R1A-SM-3LK6M 65.5
GTEX-12WSF-0011-R1a-SM-5DUVI 65.5
GTEX-12WSH-0011-R1a-SM-5GU5V 63.8
GTEX-13NYB-0011-R1b-SM-5KM4F 62.6
GTEX-13OW7-0011-R1b-SM-5L3HF 60.9
GTEX-13S7M-0011-R1b-SM-5PNZE 60.4
GTEX-11UD1-0011-R1b-SM-5BC7D 60.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60.3
GTEX-WZTO-0011-R1B-SM-3NMAR 59.7
GTEX-13X6I-0011-R1b-SM-5PNZC 59.6
GTEX-14ASI-0011-R1b-SM-5S2TY 59.0
GTEX-13O3O-0011-R1b-SM-5KM2K 58.7
GTEX-13NYS-0011-R1b-SM-5MR55 58.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 58.1
GTEX-13FLW-0011-R1b-SM-5LZX2 57.3
GTEX-WVLH-0011-R1A-SM-4MVOK 56.7
GTEX-YFC4-0011-R1a-SM-4V6EH 56.6
GTEX-13OW6-0011-R1a-SM-5L3HQ 56.2
GTEX-1313W-0011-R1b-SM-5EQ4A 56.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 55.5
GTEX-12WSB-0011-R1b-SM-5P9EY 55.1
GTEX-12WSD-0011-R1b-SM-5LZVY 54.7
GTEX-12WSM-0011-R1a-SM-5LZW6 53.9
GTEX-13FHO-0011-R1b-SM-5KLZG 53.8
GTEX-131YS-0011-R1a-SM-5DUXC 53.7
GTEX-11GSO-0011-R1b-SM-57WD3 53.3
GTEX-ZUA1-0011-R1a-SM-4YCE2 52.7
GTEX-ZAB4-0011-R1a-SM-4RGNO 52.2
GTEX-145LU-0011-R1a-SM-5Q5CE 51.8
GTEX-145LS-0011-R1b-SM-5PNUP 51.8
GTEX-13JVG-0011-R1a-SM-5KM32 51.5
GTEX-X4XX-0011-R1B-SM-3P622 51.5
GTEX-132Q8-0011-R1a-SM-5EGLK 51.5
GTEX-13112-0011-R1b-SM-5HL7K 51.4
GTEX-13QJC-0011-R1b-SM-5S2UU 50.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 50.2
GTEX-XMD1-0011-R1A-SM-4AT4C 50.2
GTEX-145MH-0011-R1b-SM-5PNWY 49.7
GTEX-QVJO-0011-R1A-SM-2S1QI 49.7
GTEX-13PDP-0011-R1a-SM-5PNX5 49.6
GTEX-T6MN-0011-R1A-SM-32QOY 49.4
GTEX-RNOR-0011-R1A-SM-5SI8F 49.4
GTEX-P44H-0011-R1A-SM-3NM8J 49.2
GTEX-131XH-0011-R1a-SM-5DUWA 47.6
GTEX-WWYW-0011-R1A-SM-3TW8G 47.5
GTEX-QVUS-0011-R1A-SM-3GAD2 45.4
GTEX-S7SE-0011-R1A-SM-2XCDE 43.5
GTEX-PVOW-0011-R1A-SM-32PL6 43.2
GTEX-11ZTS-0011-R1a-SM-5BC71 40.8
GTEX-13SLW-0011-R1a-SM-5S2W7 40.5
GTEX-13OW8-0011-R1a-SM-5L3HI 40.1
GTEX-R55E-0011-R1A-SM-2TC6N 39.6
GTEX-NL3H-0011-R1a-SM-48TDJ 39.4
GTEX-T5JC-0011-R1A-SM-32PM6 39.2
GTEX-13NZA-0011-R1b-SM-5LUAF 38.2
GTEX-13FHP-0011-R1b-SM-5K7XL 37.9
GTEX-11ONC-0011-R1a-SM-57WD4 37.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 36.9
GTEX-1212Z-0011-R1b-SM-5BC72 36.6
GTEX-TSE9-0011-R1A-SM-3DB7E 36.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 35.8
GTEX-PWO3-0011-R1A-SM-2I5EW 35.1
GTEX-UTHO-0011-R1A-SM-3GIJO 34.3
GTEX-NPJ7-0011-R1a-SM-3GACT 33.9
GTEX-ZF28-0011-R1a-SM-4WWD1 32.2
GTEX-QDT8-0011-R1A-SM-32PKS 29.9
GTEX-13FTY-0011-R1a-SM-5LZXE 29.9
GTEX-QMR6-0011-R1A-SM-32PKW 29.4
GTEX-13CF2-0011-R1a-SM-5LZY1 29.1
GTEX-YJ89-0011-R1a-SM-4RGLS 28.9
GTEX-ZVZQ-0011-R1a-SM-57WBU 28.0
GTEX-144GO-0011-R1a-SM-5PNWO 24.1
GTEX-ZE7O-0011-R1a-SM-57WDM 21.1
GTEX-139T8-0011-R1a-SM-5HL75 20.8
GTEX-NPJ8-0011-R1a-SM-33HCB 19.5
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

107.5

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 107.5
FF:10374-105G5 89 years, female 117.5
FF:10169-103B7 60 years, female 116.3
FF:10153-102I9 76 years, female 88.7

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.