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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:303.3TPM
GTEx:75.4RPKM
FANTOM5:534.8Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA027526

 

Glandular cells

High  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

303.3

overview Male, age 65
Sample 1
TPM: 278.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 367.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 255.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 311.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

75.4

GTEx sample id

RPKM

53.173.197.222.4150.2020406080100120140
 
53.173.197.222.4150.2020406080100120140

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 75.4
Samples: 88

Max RPKM: 150.2
Min RPKM: 22.4
Std RPKM: 29.6
Median RPKM: 73
GTEX-ZYFG-2026-SM-5E43Y 150.2
GTEX-YB5E-1526-SM-5IFIE 146.1
GTEX-XGQ4-1326-SM-4GIDU 140.7
GTEX-XUZC-1426-SM-4BRV3 133.0
GTEX-14DAR-1426-SM-5RQIR 119.8
GTEX-139YR-2226-SM-5IFFW 115.7
GTEX-145LT-1026-SM-5LU9O 115.7
GTEX-ZXES-1526-SM-5NQ95 114.6
GTEX-133LE-1426-SM-5IFH1 114.0
GTEX-ZLV1-1126-SM-4WWBW 113.2
GTEX-11EQ9-1326-SM-5985X 112.9
GTEX-YEC4-1726-SM-4W21E 112.7
GTEX-ZPCL-1726-SM-57WEO 112.5
GTEX-13113-1226-SM-5EGHT 112.1
GTEX-ZZ64-0526-SM-5GZXM 108.7
GTEX-ZA64-1226-SM-5HL7B 106.3
GTEX-Y5LM-1626-SM-4VDTB 105.6
GTEX-131XF-1326-SM-5GCMQ 103.7
GTEX-ZYWO-1526-SM-5SIAL 102.0
GTEX-13FTW-2026-SM-5IJE2 99.6
GTEX-1122O-1326-SM-5H11F 99.3
GTEX-11DXX-1626-SM-5H11H 99.1
GTEX-111YS-1426-SM-5GID8 96.5
GTEX-ZTSS-0926-SM-59865 95.2
GTEX-WFG8-1626-SM-4LVMB 93.6
GTEX-X5EB-1626-SM-4E3IV 91.3
GTEX-WQUQ-2426-SM-4MVNW 91.3
GTEX-13PL7-2626-SM-5IFH4 89.6
GTEX-ZVZP-1826-SM-5GZXB 89.6
GTEX-ZTX8-0526-SM-59HLD 88.7
GTEX-13D11-0726-SM-5LZZB 87.4
GTEX-14E6E-1626-SM-5RQI7 86.6
GTEX-11I78-1126-SM-5A5K5 85.6
GTEX-VJYA-0926-SM-4KL1N 84.6
GTEX-13RTK-0826-SM-5Q5C6 84.3
GTEX-YF7O-1826-SM-5IFIU 83.5
GTEX-1399R-2026-SM-5K7WN 80.9
GTEX-11DXZ-1326-SM-5H11X 78.3
GTEX-139T6-1026-SM-5IJGC 77.4
GTEX-XBED-1426-SM-4AT4G 75.2
GTEX-11P7K-1626-SM-5GU63 74.7
GTEX-Y9LG-1626-SM-5IFHM 74.0
GTEX-ZEX8-1826-SM-57WBH 73.2
GTEX-WFJO-0926-SM-4LVM2 73.2
GTEX-11P82-0826-SM-5P9GU 72.9
GTEX-ZTPG-2626-SM-57WFX 71.9
GTEX-ZVT2-2126-SM-5NQ93 70.8
GTEX-XXEK-1026-SM-4BRUW 70.6
GTEX-WRHK-1026-SM-4MVOD 68.8
GTEX-13O61-1326-SM-5KM31 66.3
GTEX-11NSD-1726-SM-5N9C3 64.6
GTEX-ZVP2-1726-SM-5GU5P 64.4
GTEX-ZP4G-1626-SM-57WGD 63.5
GTEX-WFG7-1726-SM-4LVME 63.4
GTEX-13CF3-1226-SM-5LZXN 63.2
GTEX-1399S-2026-SM-5KM4B 62.4
GTEX-Z9EW-0926-SM-5CVMM 62.3
GTEX-ZLFU-1526-SM-4WWBT 61.6
GTEX-ZPIC-2326-SM-57WDW 61.2
GTEX-XAJ8-0526-SM-47JYK 60.4
GTEX-131XG-1726-SM-5LZUR 60.0
GTEX-1399U-2126-SM-5IFEZ 58.7
GTEX-Y3IK-1726-SM-4YCCR 57.2
GTEX-11XUK-1426-SM-5EQMG 55.8
GTEX-ZQG8-2526-SM-57WEQ 55.0
GTEX-13FH7-1226-SM-5IJFK 53.5
GTEX-12BJ1-1926-SM-5HL9Z 52.0
GTEX-WH7G-1626-SM-4LVMY 50.5
GTEX-13QBU-1926-SM-5IJEW 50.3
GTEX-X15G-1426-SM-4PQZK 45.8
GTEX-13O21-1026-SM-5IJDU 45.6
GTEX-11VI4-1626-SM-5EQKO 45.3
GTEX-Y114-1426-SM-4TT6W 42.1
GTEX-12WSK-1526-SM-5CVNO 41.8
GTEX-145ME-0926-SM-5O9AR 40.4
GTEX-UPK5-2026-SM-4JBIM 39.2
GTEX-1192X-2526-SM-59868 39.2
GTEX-13111-1426-SM-5DUW3 39.0
GTEX-117YX-0326-SM-5GICL 38.3
GTEX-111CU-1326-SM-5NQ8L 37.3
GTEX-148VJ-2226-SM-5NQ9M 35.2
GTEX-13OVI-1926-SM-5IJCG 33.3
GTEX-ZF2S-1726-SM-57WFT 32.7
GTEX-WEY5-1526-SM-4LMJF 30.9
GTEX-XMK1-1826-SM-4B66F 30.3
GTEX-ZQUD-0926-SM-57WE3 30.3
GTEX-VUSG-1726-SM-4KKZL 29.9
GTEX-ZC5H-2326-SM-4WAYT 22.4
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

534.8

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 534.8
FF:10024-101D6 15,40,85 years, mixed 534.8

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