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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:13.4TPM
GTEx:8.8RPKM
FANTOM5:20.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody CAB008973

  

Antibody CAB012962

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Low   Low  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody CAB008973

  

Antibody CAB012962

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Low  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

13.4
N/A Female, age 80
Sample 1
TPM: 20.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 9.1
N/A Female, age 57
Sample 3
TPM: 7.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 13.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 16.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

8.8

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 10.4
Samples: 350

Max RPKM: 57.4
Min RPKM: 1.1
Std RPKM: 6.8
Median RPKM: 9
GTEX-13PLJ-0126-SM-5L3HU 57.4
GTEX-ZE7O-0226-SM-5S2N1 40.9
GTEX-1269C-2726-SM-5EGJ4 40.8
GTEX-12WSB-0226-SM-5GCOR 34.4
GTEX-14C5O-0226-SM-5SI6O 34.4
GTEX-13CF2-2626-SM-5LZZA 33.2
GTEX-13VXU-0226-SM-5SI9R 32.8
GTEX-XBEC-0326-SM-4AT4M 27.9
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 6.3
Samples: 227

Max RPKM: 29.6
Min RPKM: 1
Std RPKM: 4.1
Median RPKM: 5.3
GTEX-13X6I-1526-SM-5SIAC 29.6
GTEX-X8HC-2326-SM-4QAS4 25.8
GTEX-ZYW4-2226-SM-5GZYG 19.9
GTEX-13FHO-2026-SM-5J1OA 18.4
GTEX-ZTPG-2326-SM-57WFL 17.5
GTEX-11ZTS-1326-SM-5EQMA 16.5
GTEX-132Q8-1726-SM-5EGK8 15.8
GTEX-13U4I-1726-SM-5J1MF 15.1
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

20.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 20.6
FF:10010-101C1 65,65,76 years, mixed 20.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.