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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:25.3TPM
GTEx:36.2RPKM
FANTOM5:191.3Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Glandular cells:High
Myoepithelial cells:Medium
 
 

Antibody staining

Antibody HPA021563

 

Antibody CAB012226

 

Antibody CAB016388

 

Antibody CAB022311

 

Adipocytes

Low   Medium   High  

Glandular cells

Medium   High   High   High  

Myoepithelial cells

Medium   High   High   High  
          
       
       
       

BREAST - HPA RNA-seq

Average TPM

25.3

overview Female, age 52
Sample 1
TPM: 21.2
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 23.8
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 30.4
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 25.9
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

36.2

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 36.2
Samples: 214

Max RPKM: 69.9
Min RPKM: 15.3
Std RPKM: 9.7
Median RPKM: 35.2
GTEX-QEG5-0726-SM-4R1JQ 69.9
GTEX-ZF2S-2026-SM-5E461 67.3
GTEX-11GS4-2126-SM-5A5KR 64.0
GTEX-11EMC-2026-SM-5A5JV 60.2
GTEX-Y8LW-1626-SM-5IFHX 60.2
GTEX-11EM3-1326-SM-5N9C6 59.9
GTEX-ZF29-1926-SM-5S2P1 57.9
GTEX-ZZPU-0626-SM-5E43T 55.4
GTEX-YFC4-1426-SM-5IFJG 54.1
GTEX-147F4-2826-SM-5NQBN 53.3
GTEX-ZXES-0826-SM-5E43C 53.3
GTEX-ZAJG-0626-SM-5HL8X 52.2
GTEX-13FTY-2226-SM-5J1ND 52.0
GTEX-T6MN-0726-SM-32PML 51.8
GTEX-ZV7C-1826-SM-5NQ83 51.6
GTEX-12ZZX-1126-SM-5EGKB 51.5
GTEX-ZY6K-1626-SM-5GZWV 51.5
GTEX-1269C-2426-SM-5FQSN 51.3
GTEX-U412-1826-SM-4DXTJ 50.7
GTEX-R55F-1726-SM-2TF4R 50.1
GTEX-11P7K-0726-SM-5EGKX 49.7
GTEX-U3ZH-1426-SM-4DXSR 49.7
GTEX-ZC5H-2626-SM-5J2MG 49.0
GTEX-11PRG-0826-SM-5EQ6A 48.8
GTEX-131YS-0626-SM-5EGKL 48.8
GTEX-Q2AG-0326-SM-48U1O 48.5
GTEX-13NZB-2126-SM-5MR4Y 47.9
GTEX-11LCK-2426-SM-5HL5F 47.6
GTEX-1211K-1926-SM-5EQLB 47.5
GTEX-SIU7-1626-SM-4BRUK 47.3
GTEX-Y3IK-2326-SM-4WWDT 47.2
GTEX-117XS-1926-SM-5GICO 47.1
GTEX-13NZ9-1026-SM-5MR5K 47.0
GTEX-111YS-1926-SM-5GICC 46.8
GTEX-12WSM-1726-SM-5BC6J 46.4
GTEX-1122O-1226-SM-5H113 46.0
GTEX-144GM-0926-SM-5O994 45.5
GTEX-QDT8-0626-SM-48TYW 45.5
GTEX-11TUW-1826-SM-5BC5D 45.4
GTEX-XBED-1626-SM-47JYN 45.3
GTEX-Y5V5-2126-SM-4WWFO 45.3
GTEX-ZU9S-1926-SM-5NQBP 44.9
GTEX-131XW-0726-SM-5EGK3 44.8
GTEX-13CF2-2026-SM-5K7VI 44.3
GTEX-132Q8-1426-SM-5EGK7 43.9
GTEX-Y114-2026-SM-4TT7L 43.9
GTEX-11WQC-1726-SM-5GU4W 43.8
GTEX-UJHI-1426-SM-3DB9C 43.6
GTEX-13W3W-1226-SM-5LU4H 43.4
GTEX-11P81-1926-SM-5BC53 43.2
GTEX-12WSN-1326-SM-5GCNT 42.7
GTEX-X15G-1626-SM-3NMB3 42.6
GTEX-TMMY-0726-SM-33HBE 42.5
GTEX-QEL4-2126-SM-447AE 42.4
GTEX-X4EP-2926-SM-3P5YQ 42.0
GTEX-12BJ1-1826-SM-5HL9N 41.6
GTEX-13QIC-2326-SM-5LU5N 41.6
GTEX-ZTX8-1226-SM-4YCE9 41.6
GTEX-RWS6-1926-SM-47JXY 41.4
GTEX-S4UY-0726-SM-4AD6X 41.1
GTEX-133LE-1726-SM-5K7VQ 40.7
GTEX-S341-1526-SM-4AD6K 40.5
GTEX-ZA64-1526-SM-5CVMD 40.5
GTEX-11EI6-0626-SM-5985T 40.4
GTEX-WXYG-2226-SM-4E3IM 40.3
GTEX-ZDYS-1126-SM-5K7UB 40.1
GTEX-Y5V6-2126-SM-4WWFX 40.0
GTEX-12WSB-0626-SM-59HJO 39.6
GTEX-XUJ4-1926-SM-4BOOV 39.4
GTEX-Y111-2026-SM-4SOJA 39.4
GTEX-S4P3-1326-SM-4AD6V 39.1
GTEX-13D11-1026-SM-5IJFB 39.0
GTEX-13113-1726-SM-5GCOO 38.9
GTEX-WYVS-1726-SM-3NMAY 38.8
GTEX-Y3I4-1526-SM-4TT7K 38.8
GTEX-ZLV1-1426-SM-4WWES 38.6
GTEX-13OW5-2226-SM-5L3HC 38.5
GTEX-13N11-1726-SM-5J1OJ 38.4
GTEX-11NV4-2026-SM-5N9DG 38.2
GTEX-ZVT4-1026-SM-57WC4 38.2
GTEX-XUZC-1626-SM-4BRVP 38.1
GTEX-ZDTT-2126-SM-5S2OJ 38.0
GTEX-13O3P-0826-SM-5L3DH 37.9
GTEX-YFCO-1826-SM-4W1YH 37.9
GTEX-1313W-0826-SM-5EQ4T 37.6
GTEX-XUW1-2326-SM-4BOO5 37.6
GTEX-1399U-1826-SM-5PNZ1 37.5
GTEX-XOT4-0726-SM-4GIAW 37.4
GTEX-11ZTT-2326-SM-5EQLG 37.2
GTEX-RU72-0626-SM-46MUI 37.2
GTEX-T5JC-2126-SM-32PMO 37.0
GTEX-T5JW-2026-SM-4DM63 37.0
GTEX-YEC3-1026-SM-5IFI5 36.9
GTEX-YJ8O-2226-SM-5IFHW 36.6
GTEX-1117F-2826-SM-5GZXL 36.3
GTEX-ZEX8-2226-SM-57WC6 36.3
GTEX-11DXY-2326-SM-5GICW 36.2
GTEX-13PVQ-1026-SM-5KM3M 36.1
GTEX-U3ZN-1926-SM-4DXSG 36.1
GTEX-R55D-0826-SM-48FEA 36.0
GTEX-ZVTK-0326-SM-51MRR 36.0
GTEX-132AR-0826-SM-5EGK6 35.8
GTEX-YB5K-1626-SM-5IFIN 35.7
GTEX-11GSO-1926-SM-5A5K3 35.6
GTEX-13N1W-0626-SM-5MR4U 35.5
GTEX-ZUA1-1526-SM-59HLS 35.3
GTEX-WYJK-1326-SM-3NB2T 35.2
GTEX-ZV6S-1826-SM-5NQ8D 35.2
GTEX-13O61-1826-SM-5KM4I 34.8
GTEX-139T8-0826-SM-5L3DE 34.7
GTEX-Y9LG-1426-SM-5IFJZ 34.5
GTEX-XGQ4-0926-SM-4AT4U 34.4
GTEX-145MN-1926-SM-5SIAI 34.3
GTEX-11DXZ-1926-SM-5GZZL 34.1
GTEX-12WSK-2226-SM-5GCO5 33.9
GTEX-QMRM-1626-SM-4R1KV 33.9
GTEX-ZQUD-1926-SM-51MSA 33.5
GTEX-145MO-0826-SM-5NQBL 33.4
GTEX-QVJO-1826-SM-447C9 33.4
GTEX-UPK5-2326-SM-3P5Z8 33.3
GTEX-WYBS-0926-SM-3NM94 33.3
GTEX-139TU-0626-SM-5KM3X 33.2
GTEX-13O3Q-2226-SM-5KM4O 33.2
GTEX-117YX-1426-SM-5H12H 32.6
GTEX-13FHO-0826-SM-5L3E8 32.6
GTEX-WFON-1826-SM-3GILG 32.5
GTEX-11TT1-2126-SM-5GU5Y 32.3
GTEX-11ZUS-0826-SM-5FQUY 32.3
GTEX-12KS4-0126-SM-5Q5A5 32.3
GTEX-WRHU-0326-SM-3MJFY 32.3
GTEX-ZF3C-2326-SM-5S2MZ 32.2
GTEX-146FH-0826-SM-5SI8T 32.1
GTEX-WI4N-1426-SM-3LK7H 32.0
GTEX-ZPIC-1126-SM-5BC7F 32.0
GTEX-ZQG8-0726-SM-5P9H9 31.9
GTEX-11P82-1326-SM-5HL62 31.8
GTEX-144GL-2026-SM-5LU3O 31.8
GTEX-13OW8-0226-SM-5K7UP 31.7
GTEX-145LT-0726-SM-5S2VM 31.6
GTEX-R3RS-0626-SM-48FE1 31.5
GTEX-T2IS-1526-SM-32QPR 31.4
GTEX-11I78-2226-SM-5PNYA 31.2
GTEX-ZVT2-1826-SM-5NQ8W 31.1
GTEX-ZVZQ-0826-SM-51MRF 31.1
GTEX-YB5E-1726-SM-5IFJ3 30.9
GTEX-ZYT6-0126-SM-5E45J 30.9
GTEX-ZYW4-0826-SM-5GIDG 30.9
GTEX-TML8-1226-SM-32QON 30.8
GTEX-ZVE2-1226-SM-5NQ8R 30.8
GTEX-1192X-2326-SM-5987X 30.6
GTEX-11NSD-0926-SM-5N9DR 30.5
GTEX-Y5LM-1726-SM-4VDSX 30.5
GTEX-139T6-1626-SM-5PNYZ 30.3
GTEX-VUSG-2226-SM-4KKZO 30.2
GTEX-11EQ9-1826-SM-5Q5AJ 30.0
GTEX-11DXW-0626-SM-5N9ER 29.7
GTEX-13CF3-2126-SM-5IFJP 29.7
GTEX-11WQK-2426-SM-5GU5C 29.6
GTEX-13PL6-2926-SM-5L3I2 29.4
GTEX-145ME-1526-SM-5Q5F2 29.4
GTEX-13FTW-1426-SM-5LZWZ 28.8
GTEX-S4Q7-1126-SM-4AD6R 28.8
GTEX-ZYWO-2326-SM-5GZY4 28.7
GTEX-14753-2426-SM-5LU8U 28.5
GTEX-R53T-1526-SM-48FEK 28.5
GTEX-11OF3-1926-SM-59889 28.4
GTEX-11ONC-2126-SM-5HL6E 28.4
GTEX-XMD2-0926-SM-4WWEF 28.4
GTEX-RUSQ-2026-SM-4GIAK 28.3
GTEX-XYKS-1326-SM-4BRUN 28.3
GTEX-X4XY-0926-SM-4E3JD 28.0
GTEX-ZZ64-1226-SM-5E43R 28.0
GTEX-T6MO-0326-SM-32QOK 27.9
GTEX-XV7Q-2326-SM-4BRVZ 27.8
GTEX-ZLFU-2126-SM-4WWEV 27.8
GTEX-ZYFC-0826-SM-5E44K 27.4
GTEX-13NZ8-0126-SM-5IJCT 27.3
GTEX-S7SE-0826-SM-4AT4D 27.3
GTEX-X261-0626-SM-3NMD9 27.3
GTEX-S32W-2026-SM-4AD6E 26.8
GTEX-VJWN-0726-SM-3GIJ8 26.7
GTEX-XMD1-0826-SM-4AT52 26.6
GTEX-TKQ1-0226-SM-33HB5 26.4
GTEX-XQ3S-1326-SM-4BOPQ 26.2
GTEX-ZT9W-2026-SM-51MRA 26.2
GTEX-13O3O-0826-SM-5K7WE 25.9
GTEX-TKQ2-1826-SM-33HB2 25.8
GTEX-SE5C-2126-SM-4BRUJ 25.7
GTEX-XQ8I-2426-SM-4WAXY 25.6
GTEX-ZWKS-2826-SM-5NQ74 25.6
GTEX-WOFL-0826-SM-3MJG1 25.3
GTEX-14E6E-1326-SM-5S2NR 25.2
GTEX-1314G-1226-SM-5BC6D 24.6
GTEX-13W46-0826-SM-5LU3H 24.5
GTEX-S33H-0326-SM-4AD6N 24.5
GTEX-Y8E4-1626-SM-5S2MW 24.3
GTEX-ZTTD-1026-SM-51MRD 24.3
GTEX-13FTX-1126-SM-5N9EN 23.7
GTEX-REY6-2426-SM-48FF5 23.5
GTEX-11DZ1-0326-SM-5N9BN 23.1
GTEX-132NY-0826-SM-5K7Y7 23.1
GTEX-14AS3-1626-SM-5S2OY 23.1
GTEX-11O72-2126-SM-5N9FO 22.8
GTEX-W5X1-2326-SM-3GIL6 22.8
GTEX-T2YK-2226-SM-32QPT 22.7
GTEX-13S86-1226-SM-5S2OA 22.3
GTEX-U8XE-0826-SM-4E3J1 21.9
GTEX-XMK1-1126-SM-4IHJ8 21.6
GTEX-PSDG-1626-SM-48TCQ 20.8
GTEX-WY7C-2726-SM-3NB3P 19.4
GTEX-ZDXO-0126-SM-5S2ND 18.4
GTEX-ZAB4-2526-SM-5HL8M 17.4
GTEX-UTHO-1026-SM-3GAF7 16.4
GTEX-14ABY-2126-SM-5QGQZ 15.3
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

191.3

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 191.3
FF:10080-102A8 77 years, female 191.3

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