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POLR2A

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:24.0TPM
GTEx:25.3RPKM
FANTOM5:159.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 
 

Antibody staining

Antibody HPA021563

  

Antibody CAB012226

  

Antibody CAB016388

  

Antibody CAB022311

  

Endothelial cells

 Not detected   High   High   Not detected  

Glandular cells

 High   High   High   High  

Peripheral nerve/ganglion

 Medium   High  
          
       
       

COLON - HPA RNA-seq

Average TPM

24.0
overview Male, age 54
Sample 1
TPM: 26.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 18.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 23.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 31.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 15.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 21.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 26.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 25.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 25.0
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 20.0
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 37.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 21.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 18.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

25.3

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 19.7
Samples: 149

Max RPKM: 38
Min RPKM: 9.1
Std RPKM: 5.7
Median RPKM: 19.3
GTEX-148VJ-2426-SM-5NQ9Y 38.0
GTEX-1211K-1826-SM-5EGJ2 33.8
GTEX-13OVI-2126-SM-5KM3U 33.8
GTEX-13111-1926-SM-5GCOL 33.4
GTEX-14E6C-2226-SM-5QGQG 33.0
GTEX-13O1R-2426-SM-5KLZZ 31.9
GTEX-WFON-1326-SM-4LVMN 31.5
GTEX-Y5LM-1426-SM-5RQJL 29.9
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 29.6
Samples: 196

Max RPKM: 64.5
Min RPKM: 13.2
Std RPKM: 7.8
Median RPKM: 29.8
GTEX-UPIC-1726-SM-4IHKG 64.5
GTEX-Y5LM-1526-SM-4VDTA 45.0
GTEX-WFG7-1526-SM-4LVMG 44.5
GTEX-131XG-1826-SM-5LZV4 44.1
GTEX-11EM3-1526-SM-5A5KN 43.7
GTEX-144GN-1126-SM-5LU33 43.2
GTEX-XMK1-1726-SM-4B64Z 42.5
GTEX-12C56-0626-SM-5EGGC 42.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

159.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 159.8
FF:10014-101C5 62,83,84 years, mixed 159.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.