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COL18A1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:73.4TPM
GTEx:59.3RPKM
FANTOM5:66.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not detected
Fibroblasts:Medium
Peripheral nerve:Medium
 
 
 

Antibody staining

Antibody HPA011025

  

Antibody CAB001961

  

Adipocytes

 Low   Medium  

Chondrocytes

 Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Medium  
      
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA011025

  

Antibody CAB001961

  

Adipocytes

 Low   Medium  

Fibroblasts

 Low   Not detected  

Peripheral nerve

 Medium   Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

73.4
N/A Female, age 80
Sample 1
TPM: 148.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 67.3
N/A Female, age 57
Sample 3
TPM: 60.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 34.0
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 56.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

59.3

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 65.6
Samples: 350

Max RPKM: 165.3
Min RPKM: 16.3
Std RPKM: 28.6
Median RPKM: 58.3
GTEX-145MF-0526-SM-5LUA6 165.3
GTEX-1269C-2726-SM-5EGJ4 155.6
GTEX-13QJ3-0426-SM-5RQHP 149.1
GTEX-Y111-0226-SM-4SOIW 147.1
GTEX-13OVL-0326-SM-5IJCS 140.9
GTEX-11P81-2426-SM-5GU65 140.0
GTEX-WL46-0326-SM-3LK6Y 137.0
GTEX-11OF3-2426-SM-5Q5AS 133.0
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 49.5
Samples: 227

Max RPKM: 185.4
Min RPKM: 16.8
Std RPKM: 18.2
Median RPKM: 48.5
GTEX-X8HC-2326-SM-4QAS4 185.4
GTEX-13OVH-1126-SM-5K7YP 135.6
GTEX-1117F-1326-SM-5EGHH 106.3
GTEX-WWTW-1326-SM-4MVNT 102.8
GTEX-13OW7-1126-SM-5K7V6 97.1
GTEX-11P81-0726-SM-5PNYH 80.1
GTEX-ZYVF-1026-SM-5E44V 76.6
GTEX-13JUV-0626-SM-5J1MQ 76.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

66.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 66.3
FF:10010-101C1 65,65,76 years, mixed 66.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.