Tissue expression of COL18A1 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	13.6	TPM
GTEx:	18.3	RPKM
FANTOM5:	66.7	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Medium

Antibody staining	Antibody HPA011025	Antibody CAB001961
Squamous epithelial cells	Medium	Not detected

ESOPHAGUS - HPA RNA-seq

Average TPM	13.6

Female, age 70

Sample 1
TPM: 12.9

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 18.8

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 9.1

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	18.3

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 18.3

Samples: 286

Max RPKM: 46.8
Min RPKM: 5.6
Std RPKM: 7.3
Median RPKM: 17.1

GTEX-TSE9-1226-SM-4DXTM

46.8

GTEX-13X6I-1026-SM-5LU4C

42.9

GTEX-Y111-1626-SM-57WCY

40.5

GTEX-13OVJ-1226-SM-5L3HA

39.8

GTEX-P4PP-0626-SM-3NM9X

39.0

GTEX-13PVQ-1726-SM-5IFF3

38.7

GTEX-R45C-1226-SM-48FEE

38.7

GTEX-RUSQ-0826-SM-47JWW

37.9

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	66.7

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 66.7

FF:10015-101C6

68,74,75 years, mixed

66.7