Tissue expression of COL18A1 - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	31.1	TPM
GTEx:	29.1	RPKM
FANTOM5:	53.7	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Low

Antibody staining	Antibody HPA011025	Antibody CAB001961
Glandular cells	Low	Not detected

SMALL INTESTINE - HPA RNA-seq

Average TPM	31.1

Male, age 65

Sample 1
TPM: 24.1

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 27.8

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 43.8

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 28.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	29.1

GTEx sample id

RPKM

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 29.1

Samples: 88

Max RPKM: 73.6
Min RPKM: 8.7
Std RPKM: 15.3
Median RPKM: 24.5

GTEX-1192X-2526-SM-59868

73.6

GTEX-131XG-1726-SM-5LZUR

69.9

GTEX-13QBU-1926-SM-5IJEW

67.5

GTEX-WFG8-1626-SM-4LVMB

67.1

GTEX-148VJ-2226-SM-5NQ9M

65.4

GTEX-ZTPG-2626-SM-57WFX

63.0

GTEX-13O21-1026-SM-5IJDU

59.5

GTEX-VUSG-1726-SM-4KKZL

54.6

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	53.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 53.7

FF:10024-101D6

15,40,85 years, mixed

53.7