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Gene name

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External id

In atlas

Reliability

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Validation

Method

Validation

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Expression

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Specificity

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Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:621.1TPM
GTEx:764.0RPKM
FANTOM5:1764.6Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Glandular cells:Low
Myoepithelial cells:High
 

Antibody staining

Antibody HPA041264

 

Antibody HPA041271

 

Adipocytes

High   Not detected  

Glandular cells

High   Low  

Myoepithelial cells

High   High  
   
   
   

BREAST - HPA RNA-seq

Average TPM

621.1

overview Female, age 52
Sample 1
TPM: 917.7
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 653.5
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 651.4
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 262.0
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

764.0

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 764.0
Samples: 214

Max RPKM: 1545.3
Min RPKM: 299.5
Std RPKM: 206
Median RPKM: 761.8
GTEX-T2IS-1526-SM-32QPR 1545.3
GTEX-WOFL-0826-SM-3MJG1 1391.4
GTEX-14AS3-1626-SM-5S2OY 1299.9
GTEX-11DZ1-0326-SM-5N9BN 1263.2
GTEX-REY6-2426-SM-48FF5 1240.3
GTEX-X4EP-2926-SM-3P5YQ 1232.1
GTEX-139T8-0826-SM-5L3DE 1227.0
GTEX-11DXW-0626-SM-5N9ER 1133.2
GTEX-U8XE-0826-SM-4E3J1 1132.0
GTEX-13O3O-0826-SM-5K7WE 1109.7
GTEX-RU72-0626-SM-46MUI 1104.5
GTEX-12ZZX-1126-SM-5EGKB 1096.4
GTEX-11TT1-2126-SM-5GU5Y 1084.9
GTEX-YFC4-1426-SM-5IFJG 1074.7
GTEX-13PL6-2926-SM-5L3I2 1063.6
GTEX-1117F-2826-SM-5GZXL 1063.0
GTEX-13W46-0826-SM-5LU3H 1036.5
GTEX-XOT4-0726-SM-4GIAW 1034.6
GTEX-ZTTD-1026-SM-51MRD 1032.3
GTEX-R3RS-0626-SM-48FE1 1031.8
GTEX-QDT8-0626-SM-48TYW 1027.0
GTEX-ZC5H-2626-SM-5J2MG 1025.5
GTEX-ZEX8-2226-SM-57WC6 1015.6
GTEX-ZYFC-0826-SM-5E44K 1012.5
GTEX-1313W-0826-SM-5EQ4T 1007.7
GTEX-11EQ9-1826-SM-5Q5AJ 1006.3
GTEX-13NZ9-1026-SM-5MR5K 1004.5
GTEX-VJWN-0726-SM-3GIJ8 988.1
GTEX-Y3IK-2326-SM-4WWDT 984.3
GTEX-U3ZN-1926-SM-4DXSG 981.6
GTEX-147F4-2826-SM-5NQBN 980.5
GTEX-14ABY-2126-SM-5QGQZ 971.9
GTEX-131YS-0626-SM-5EGKL 971.2
GTEX-WI4N-1426-SM-3LK7H 965.1
GTEX-ZY6K-1626-SM-5GZWV 965.0
GTEX-1269C-2426-SM-5FQSN 960.9
GTEX-UJHI-1426-SM-3DB9C 952.4
GTEX-Q2AG-0326-SM-48U1O 952.3
GTEX-13O3P-0826-SM-5L3DH 950.8
GTEX-ZA64-1526-SM-5CVMD 945.6
GTEX-XYKS-1326-SM-4BRUN 945.4
GTEX-12WSK-2226-SM-5GCO5 942.9
GTEX-13FTY-2226-SM-5J1ND 923.5
GTEX-13CF2-2026-SM-5K7VI 920.6
GTEX-X15G-1626-SM-3NMB3 917.2
GTEX-13N11-1726-SM-5J1OJ 912.6
GTEX-13QIC-2326-SM-5LU5N 897.0
GTEX-U3ZH-1426-SM-4DXSR 892.4
GTEX-ZVT4-1026-SM-57WC4 892.4
GTEX-145LT-0726-SM-5S2VM 892.2
GTEX-S341-1526-SM-4AD6K 891.2
GTEX-11P7K-0726-SM-5EGKX 888.6
GTEX-W5X1-2326-SM-3GIL6 887.2
GTEX-1314G-1226-SM-5BC6D 884.9
GTEX-XMD2-0926-SM-4WWEF 883.0
GTEX-11WQC-1726-SM-5GU4W 882.2
GTEX-1399U-1826-SM-5PNZ1 881.3
GTEX-13FHO-0826-SM-5L3E8 881.3
GTEX-WYVS-1726-SM-3NMAY 877.7
GTEX-11EM3-1326-SM-5N9C6 874.8
GTEX-ZVZQ-0826-SM-51MRF 870.4
GTEX-14E6E-1326-SM-5S2NR 860.5
GTEX-11EMC-2026-SM-5A5JV 856.9
GTEX-SE5C-2126-SM-4BRUJ 856.5
GTEX-11EI6-0626-SM-5985T 852.1
GTEX-ZAB4-2526-SM-5HL8M 851.9
GTEX-12KS4-0126-SM-5Q5A5 847.1
GTEX-S4P3-1326-SM-4AD6V 839.9
GTEX-S7SE-0826-SM-4AT4D 837.9
GTEX-Y5LM-1726-SM-4VDSX 835.6
GTEX-ZLFU-2126-SM-4WWEV 834.3
GTEX-WYBS-0926-SM-3NM94 830.2
GTEX-QVJO-1826-SM-447C9 828.8
GTEX-ZF3C-2326-SM-5S2MZ 828.5
GTEX-11P81-1926-SM-5BC53 823.2
GTEX-X261-0626-SM-3NMD9 823.0
GTEX-Y3I4-1526-SM-4TT7K 821.3
GTEX-13D11-1026-SM-5IJFB 820.4
GTEX-11PRG-0826-SM-5EQ6A 818.4
GTEX-Y8E4-1626-SM-5S2MW 817.4
GTEX-11NV4-2026-SM-5N9DG 803.6
GTEX-13OW8-0226-SM-5K7UP 802.9
GTEX-132NY-0826-SM-5K7Y7 801.4
GTEX-TML8-1226-SM-32QON 799.6
GTEX-XMD1-0826-SM-4AT52 797.3
GTEX-ZVT2-1826-SM-5NQ8W 795.4
GTEX-WYJK-1326-SM-3NB2T 791.4
GTEX-S32W-2026-SM-4AD6E 790.7
GTEX-XBED-1626-SM-47JYN 785.8
GTEX-UPK5-2326-SM-3P5Z8 780.9
GTEX-QEL4-2126-SM-447AE 780.7
GTEX-11NSD-0926-SM-5N9DR 780.4
GTEX-Y111-2026-SM-4SOJA 774.6
GTEX-Y8LW-1626-SM-5IFHX 774.6
GTEX-1211K-1926-SM-5EQLB 774.4
GTEX-11OF3-1926-SM-59889 774.3
GTEX-14753-2426-SM-5LU8U 773.4
GTEX-WXYG-2226-SM-4E3IM 773.1
GTEX-ZVE2-1226-SM-5NQ8R 771.5
GTEX-ZXES-0826-SM-5E43C 770.7
GTEX-13O3Q-2226-SM-5KM4O 769.8
GTEX-ZYWO-2326-SM-5GZY4 766.5
GTEX-T5JW-2026-SM-4DM63 765.1
GTEX-ZDXO-0126-SM-5S2ND 762.7
GTEX-Y5V5-2126-SM-4WWFO 762.4
GTEX-146FH-0826-SM-5SI8T 762.3
GTEX-ZYW4-0826-SM-5GIDG 762.3
GTEX-145MN-1926-SM-5SIAI 761.3
GTEX-ZF2S-2026-SM-5E461 758.3
GTEX-QEG5-0726-SM-4R1JQ 757.9
GTEX-TKQ2-1826-SM-33HB2 754.4
GTEX-VUSG-2226-SM-4KKZO 754.1
GTEX-11O72-2126-SM-5N9FO 746.3
GTEX-12WSN-1326-SM-5GCNT 745.1
GTEX-13113-1726-SM-5GCOO 743.3
GTEX-T2YK-2226-SM-32QPT 743.0
GTEX-TMMY-0726-SM-33HBE 742.4
GTEX-ZLV1-1426-SM-4WWES 737.5
GTEX-XQ8I-2426-SM-4WAXY 736.4
GTEX-ZTX8-1226-SM-4YCE9 735.5
GTEX-X4XY-0926-SM-4E3JD 735.0
GTEX-144GL-2026-SM-5LU3O 734.7
GTEX-133LE-1726-SM-5K7VQ 731.4
GTEX-11GS4-2126-SM-5A5KR 731.0
GTEX-11WQK-2426-SM-5GU5C 724.7
GTEX-RUSQ-2026-SM-4GIAK 724.5
GTEX-XUJ4-1926-SM-4BOOV 723.4
GTEX-12WSM-1726-SM-5BC6J 721.3
GTEX-ZPIC-1126-SM-5BC7F 719.9
GTEX-T6MO-0326-SM-32QOK 718.9
GTEX-RWS6-1926-SM-47JXY 715.6
GTEX-ZU9S-1926-SM-5NQBP 715.4
GTEX-132AR-0826-SM-5EGK6 712.6
GTEX-R55F-1726-SM-2TF4R 712.1
GTEX-ZVTK-0326-SM-51MRR 710.9
GTEX-13PVQ-1026-SM-5KM3M 708.7
GTEX-S33H-0326-SM-4AD6N 697.5
GTEX-ZAJG-0626-SM-5HL8X 696.9
GTEX-13W3W-1226-SM-5LU4H 695.1
GTEX-13NZB-2126-SM-5MR4Y 691.4
GTEX-ZF29-1926-SM-5S2P1 690.5
GTEX-XV7Q-2326-SM-4BRVZ 688.1
GTEX-131XW-0726-SM-5EGK3 687.4
GTEX-13S86-1226-SM-5S2OA 686.7
GTEX-13NZ8-0126-SM-5IJCT 684.7
GTEX-11DXY-2326-SM-5GICW 673.0
GTEX-ZZPU-0626-SM-5E43T 670.5
GTEX-T6MN-0726-SM-32PML 670.4
GTEX-XUW1-2326-SM-4BOO5 667.7
GTEX-T5JC-2126-SM-32PMO 662.9
GTEX-R53T-1526-SM-48FEK 660.6
GTEX-132Q8-1426-SM-5EGK7 660.0
GTEX-1192X-2326-SM-5987X 655.3
GTEX-Y9LG-1426-SM-5IFJZ 653.9
GTEX-WRHU-0326-SM-3MJFY 644.8
GTEX-Y114-2026-SM-4TT7L 642.3
GTEX-13N1W-0626-SM-5MR4U 638.4
GTEX-11ONC-2126-SM-5HL6E 633.9
GTEX-XGQ4-0926-SM-4AT4U 630.0
GTEX-ZUA1-1526-SM-59HLS 629.8
GTEX-117YX-1426-SM-5H12H 626.3
GTEX-13OW5-2226-SM-5L3HC 626.2
GTEX-S4UY-0726-SM-4AD6X 626.1
GTEX-YFCO-1826-SM-4W1YH 623.8
GTEX-11LCK-2426-SM-5HL5F 620.7
GTEX-ZV7C-1826-SM-5NQ83 620.3
GTEX-S4Q7-1126-SM-4AD6R 613.9
GTEX-1122O-1226-SM-5H113 602.6
GTEX-TKQ1-0226-SM-33HB5 601.9
GTEX-SIU7-1626-SM-4BRUK 598.2
GTEX-ZWKS-2826-SM-5NQ74 595.8
GTEX-12WSB-0626-SM-59HJO 595.2
GTEX-11GSO-1926-SM-5A5K3 593.1
GTEX-139TU-0626-SM-5KM3X 591.3
GTEX-11DXZ-1926-SM-5GZZL 584.1
GTEX-145MO-0826-SM-5NQBL 583.9
GTEX-UTHO-1026-SM-3GAF7 571.1
GTEX-13FTW-1426-SM-5LZWZ 565.0
GTEX-ZV6S-1826-SM-5NQ8D 563.3
GTEX-11ZUS-0826-SM-5FQUY 562.2
GTEX-XUZC-1626-SM-4BRVP 561.5
GTEX-XQ3S-1326-SM-4BOPQ 558.1
GTEX-144GM-0926-SM-5O994 555.0
GTEX-139T6-1626-SM-5PNYZ 542.2
GTEX-R55D-0826-SM-48FEA 541.4
GTEX-13FTX-1126-SM-5N9EN 539.9
GTEX-WY7C-2726-SM-3NB3P 520.2
GTEX-13CF3-2126-SM-5IFJP 514.4
GTEX-YJ8O-2226-SM-5IFHW 510.3
GTEX-WFON-1826-SM-3GILG 510.2
GTEX-ZDYS-1126-SM-5K7UB 507.5
GTEX-111YS-1926-SM-5GICC 490.3
GTEX-11P82-1326-SM-5HL62 483.0
GTEX-ZYT6-0126-SM-5E45J 482.5
GTEX-ZDTT-2126-SM-5S2OJ 477.6
GTEX-U412-1826-SM-4DXTJ 470.9
GTEX-12BJ1-1826-SM-5HL9N 464.8
GTEX-11I78-2226-SM-5PNYA 459.7
GTEX-Y5V6-2126-SM-4WWFX 455.4
GTEX-ZQG8-0726-SM-5P9H9 449.4
GTEX-117XS-1926-SM-5GICO 446.7
GTEX-13O61-1826-SM-5KM4I 440.3
GTEX-ZT9W-2026-SM-51MRA 437.0
GTEX-YB5K-1626-SM-5IFIN 432.1
GTEX-PSDG-1626-SM-48TCQ 430.9
GTEX-11TUW-1826-SM-5BC5D 422.0
GTEX-YB5E-1726-SM-5IFJ3 422.0
GTEX-ZZ64-1226-SM-5E43R 409.2
GTEX-QMRM-1626-SM-4R1KV 374.1
GTEX-ZQUD-1926-SM-51MSA 373.1
GTEX-11ZTT-2326-SM-5EQLG 367.1
GTEX-YEC3-1026-SM-5IFI5 344.8
GTEX-XMK1-1126-SM-4IHJ8 337.4
GTEX-145ME-1526-SM-5Q5F2 299.5
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

1764.6

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 1764.6
FF:10080-102A8 77 years, female 1764.6

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