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ACTG1
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:353.4RPKM
FANTOM5:1710.5Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Low
 

Antibody staining

Antibody HPA041264

 

Antibody HPA041271

 

Glial cells

Not detected   Not detected  

Neuronal cells

Low   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

353.4

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 353.4
Samples: 117

Max RPKM: 744.2
Min RPKM: 130.1
Std RPKM: 112.8
Median RPKM: 359.5
GTEX-13JUV-0011-R5a-SM-5LZY5 744.2
GTEX-13NYS-0011-R5a-SM-5MR4D 663.2
GTEX-132Q8-0011-R5a-SM-5IJDM 659.2
GTEX-T6MN-0011-R5A-SM-32QPD 590.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 550.7
GTEX-P44H-0011-R5A-SM-2XCEX 529.5
GTEX-11H98-0011-R5b-SM-57WCF 529.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 516.0
GTEX-13G51-0011-R5a-SM-5L3EB 515.3
GTEX-N7MT-0011-R5a-SM-2I3G6 505.7
GTEX-13X6K-0011-R5b-SM-5PNUE 501.6
GTEX-WHSE-0011-R5A-SM-3P5ZO 499.8
GTEX-139TT-0011-R5b-SM-5K7W8 484.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 472.9
GTEX-131YS-0011-R5b-SM-5K7YB 472.6
GTEX-ZUA1-0011-R5b-SM-51MTG 469.7
GTEX-12WSB-0011-R5b-SM-5GU67 468.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 460.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 452.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 446.6
GTEX-T5JC-0011-R5A-SM-32PLK 445.5
GTEX-UTHO-0011-R5A-SM-3GIJD 442.8
GTEX-1399T-0011-R5b-SM-5IJDK 441.9
GTEX-11GSP-0011-R5a-SM-57WBE 438.7
GTEX-11OF3-0011-R5a-SM-57WB4 436.0
GTEX-12WSC-0011-R5b-SM-5CVNS 432.1
GTEX-XMD1-0011-R5A-SM-4AT47 428.6
GTEX-14BIM-0011-R5b-SM-5S2RM 425.4
GTEX-S7SE-0011-R5A-SM-2XCDA 419.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 411.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 407.3
GTEX-OHPN-0011-R5A-SM-2I5FF 407.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 402.8
GTEX-1313W-0011-R5b-SM-5L3EP 398.5
GTEX-145LS-0011-R5a-SM-5SI65 397.6
GTEX-TSE9-0011-R5A-SM-3DB7J 397.4
GTEX-12WSA-0011-R5b-SM-5GU5I 395.6
GTEX-QVJO-0011-R5A-SM-2S1QM 393.8
GTEX-13FLV-0011-R5a-SM-5LZWT 392.2
GTEX-X585-0011-R5A-SM-46MVI 389.6
GTEX-N7MS-0011-R5a-SM-2HMK8 389.1
GTEX-139T8-0011-R5b-SM-5J1MO 386.9
GTEX-13JVG-0011-R5a-SM-5MR4O 384.8
GTEX-WWYW-0011-R5A-SM-3NB3E 384.1
GTEX-13FLW-0011-R5a-SM-5LZX6 382.0
GTEX-WVLH-0011-R5A-SM-3MJFW 380.7
GTEX-13CZV-0011-R5a-SM-5K7XA 380.2
GTEX-13X6I-0011-R5a-SM-5PNWW 380.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 378.2
GTEX-12WSF-0011-R5a-SM-5HL8K 377.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 376.2
GTEX-13OW6-0011-R5a-SM-5O9BK 375.8
GTEX-13VXU-0011-R5a-SM-5O9D7 373.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 363.7
GTEX-WL46-0011-R5A-SM-3LK6V 362.2
GTEX-14ABY-0011-R5b-SM-5SI7B 361.9
GTEX-T2IS-0011-R5A-SM-32QP4 361.9
GTEX-13O3O-0011-R5b-SM-5KM44 361.2
GTEX-145MH-0011-R5a-SM-5P9JT 359.5
GTEX-RVPV-0011-R5A-SM-2TF69 358.8
GTEX-13OW5-0011-R5b-SM-5L3FR 357.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 355.3
GTEX-ZE7O-0011-R5a-SM-57WBO 351.2
GTEX-13X6J-0011-R5b-SM-5PNWT 350.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 344.3
GTEX-13SLX-0011-R5a-SM-5O9BV 343.5
GTEX-13OVL-0011-R5b-SM-5L3FU 343.2
GTEX-13FXS-0011-R5b-SM-5LZYE 340.2
GTEX-NL4W-0011-R5a-SM-2I3GD 339.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 339.0
GTEX-R55E-0011-R5A-SM-2TC5N 333.4
GTEX-11NV4-0011-R5a-SM-5NQ88 332.6
GTEX-13OW7-0011-R5b-SM-5O9DM 331.1
GTEX-13NYB-0011-R5a-SM-5MR45 327.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 322.9
GTEX-WZTO-0011-R5B-SM-3NMC5 321.8
GTEX-RVPU-0011-R5A-SM-2XCAD 320.7
GTEX-RU72-0011-R5A-SM-2TF6U 315.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 313.6
GTEX-QMR6-0011-R5A-SM-32PKT 296.2
GTEX-X261-0011-R5A-SM-3NMB4 286.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 286.0
GTEX-13OVH-0011-R5b-SM-5KM4L 282.3
GTEX-PVOW-0011-R5A-SM-32PL7 282.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 278.7
GTEX-12WSD-0011-R5b-SM-5CVNG 275.2
GTEX-13CIG-0011-R5b-SM-5L3F2 272.9
GTEX-YFC4-0011-R5a-SM-4RGLR 261.6
GTEX-OXRN-0011-R5A-SM-2I5EF 257.7
GTEX-13S7M-0011-R5b-SM-5P9HS 256.2
GTEX-XOTO-0011-R5A-SM-4B657 256.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 252.6
GTEX-NPJ7-0011-R5a-SM-33HBK 250.2
GTEX-1445S-0011-R5a-SM-5PNUS 250.0
GTEX-139TS-0011-R5b-SM-5J2MZ 248.5
GTEX-Z93S-0011-R5b-SM-4RGNI 239.1
GTEX-14BIN-0011-R5b-SM-5SI78 233.4
GTEX-12ZZX-0011-R5a-SM-5HL89 226.7
GTEX-X4XX-0011-R5A-SM-46MWN 226.1
GTEX-ZVT3-0011-R5a-SM-51MSI 217.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 216.3
GTEX-144GO-0011-R5a-SM-5PNUR 215.8
GTEX-ZXG5-0011-R5b-SM-57WBN 214.0
GTEX-ZV68-0011-R5a-SM-4YCDW 212.2
GTEX-YJ89-0011-R5a-SM-4V6GM 210.3
GTEX-13112-0011-R5b-SM-5DUV8 209.5
GTEX-13CF2-0011-R5a-SM-5LZWS 199.5
GTEX-11WQC-0011-R5a-SM-5BC74 198.3
GTEX-144GL-0011-R5b-SM-5PNUJ 192.7
GTEX-NL3H-0011-R5a-SM-2I3GB 192.5
GTEX-12WSH-0011-R5b-SM-5P9F3 190.4
GTEX-1477Z-0011-R5b-SM-5PNUO 179.8
GTEX-S7PM-0011-R5A-SM-3NM8G 175.2
GTEX-13FHP-0011-R5b-SM-5LZY2 167.3
GTEX-11UD1-0011-R5b-SM-5P9FP 165.9
GTEX-13NZA-0011-R5b-SM-5KM4K 147.9
GTEX-145MG-0011-R5b-SM-5S2VU 130.1
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

1710.5

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 1710.5
FF:10164-103B2 76 years, female 1804.1
FF:10379-105H1 89 years, female 1616.9

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