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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:1111.0TPM
GTEx:397.5RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:Low
Neuropil:Medium
 

Antibody staining

Antibody HPA041264

 

Antibody HPA041271

 

Endothelial cells

Low   Low  

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Not detected  

Neuropil

Medium   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

1111.0

N/A Male, age 5
Sample 1
TPM: 1098.8
overview Female, age 40
Sample 2
TPM: 966.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 1268.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

397.5

GTEx sample id

RPKM

375.3411.4442.5277.7502.80100200300400500600700
 
375.3411.4442.5277.7502.80100200300400500600700

Brain - Cortex

Brain - Cortex
RPKM: 407.8
Samples: 114

Max RPKM: 763.3
Min RPKM: 136.8
Std RPKM: 80.6
Median RPKM: 411.4
GTEX-144FL-3026-SM-5O99C 763.3
GTEX-X585-3026-SM-46MWF 679.4
GTEX-132Q8-3026-SM-5PNVG 603.4
GTEX-13NYS-3126-SM-5KLYV 581.3
GTEX-13FHO-3026-SM-5J1O9 549.5
GTEX-WHSE-3026-SM-3P5ZH 502.8
GTEX-14BMV-3026-SM-5S2PQ 501.8
GTEX-13FLW-1426-SM-5K7YE 498.7
GTEX-XLM4-3026-SM-4AT6L 497.7
GTEX-11DXY-3226-SM-5GIDE 495.8
GTEX-WZTO-2926-SM-3NM9I 484.4
GTEX-QVUS-2826-SM-3GADB 480.4
GTEX-WL46-2926-SM-3LK82 476.6
GTEX-145LS-3126-SM-5Q5BY 472.3
GTEX-11OC5-0726-SM-5P9JK 466.5
GTEX-13OVJ-2826-SM-5L3GW 465.5
GTEX-13NYC-2826-SM-5K7WR 464.1
GTEX-13JVG-3126-SM-5L3FH 463.5
GTEX-R55F-1326-SM-5S2V4 461.9
GTEX-139T8-1026-SM-5J2MC 459.6
GTEX-13PVQ-3026-SM-5SI93 458.9
GTEX-WVLH-3026-SM-3MJG9 452.3
GTEX-12ZZY-3026-SM-5GCOU 449.2
GTEX-ZUA1-3026-SM-59HJC 448.0
GTEX-T5JC-2426-SM-3NMDB 447.7
GTEX-13X6K-2926-SM-5Q5D5 445.8
GTEX-14ASI-3026-SM-5S2PN 445.7
GTEX-QMR6-1426-SM-32PLA 444.8
GTEX-QDT8-2926-SM-32PKC 443.5
GTEX-T6MN-2626-SM-32PMQ 439.4
GTEX-13OW8-2826-SM-5L3GC 436.9
GTEX-13OW6-3026-SM-5J2MI 436.8
GTEX-11NUK-2926-SM-5A5MD 435.6
GTEX-131YS-3126-SM-5KLYT 433.9
GTEX-13JUV-2926-SM-5LZX7 433.0
GTEX-11PRG-2926-SM-5987A 430.6
GTEX-145MG-3026-SM-5RQJA 429.1
GTEX-ZVT3-3026-SM-5E43N 428.2
GTEX-QVJO-1426-SM-2S1QY 428.1
GTEX-13SLX-3126-SM-5S2Q5 428.0
GTEX-1313W-3126-SM-5LZUI 427.0
GTEX-ZE7O-3126-SM-5HL5X 425.3
GTEX-13NYB-3026-SM-5IJD7 425.1
GTEX-11ONC-2926-SM-5P9JM 424.8
GTEX-WWYW-3126-SM-3NB39 424.2
GTEX-T2IS-3026-SM-32QPM 423.7
GTEX-1117F-3226-SM-5N9CT 422.8
GTEX-Y111-2726-SM-4TT3N 419.5
GTEX-Z93S-2926-SM-57WB9 418.8
GTEX-12ZZW-2926-SM-5LZUP 418.6
GTEX-1192X-3126-SM-5N9BY 418.1
GTEX-145MF-2726-SM-5O995 416.6
GTEX-11TTK-2926-SM-5PNYP 416.3
GTEX-11ZUS-2926-SM-5FQSL 415.4
GTEX-145MH-3026-SM-5Q5DZ 414.7
GTEX-ZAK1-3026-SM-5S2MJ 414.5
GTEX-13FHP-3026-SM-5IJBS 411.6
GTEX-12126-1026-SM-5P9JJ 411.2
GTEX-13VXU-2926-SM-5LU5C 411.1
GTEX-12ZZX-2926-SM-5GCOQ 410.7
GTEX-13QIC-2926-SM-5J2NF 408.9
GTEX-144GL-3026-SM-5Q5CW 407.7
GTEX-12WSC-3026-SM-5GCNF 407.5
GTEX-Y8DK-0826-SM-4TT3T 405.5
GTEX-YJ89-3026-SM-5IFJI 404.9
GTEX-13FXS-3126-SM-5J2NN 403.9
GTEX-RNOR-2326-SM-2TF4I 399.2
GTEX-11GS4-3126-SM-5A5LH 398.9
GTEX-11GSO-2926-SM-5HL73 398.8
GTEX-13O3Q-2926-SM-5KM45 398.6
GTEX-ZYFD-3026-SM-5E44C 398.6
GTEX-YFC4-3126-SM-5PNV6 396.0
GTEX-NPJ7-2726-SM-2I3FT 395.6
GTEX-1399T-3026-SM-5KLZC 394.1
GTEX-11DXW-1126-SM-5H12Q 393.6
GTEX-Q2AG-2926-SM-2HMJ3 392.1
GTEX-13OVH-3026-SM-5MR4N 390.5
GTEX-TSE9-3026-SM-3DB76 388.5
GTEX-11GSP-3226-SM-5986O 388.4
GTEX-13O3O-3126-SM-5KM3H 387.3
GTEX-11WQK-3026-SM-5EQL6 385.7
GTEX-12ZZZ-3026-SM-5BC67 383.2
GTEX-NPJ8-1526-SM-2D7VU 382.8
GTEX-111FC-3126-SM-5GZZ2 381.5
GTEX-13X6J-3026-SM-5Q5CU 379.1
GTEX-PVOW-2526-SM-2XCF7 374.0
GTEX-11EMC-3226-SM-5EGKW 373.9
GTEX-117XS-3026-SM-5N9CA 373.1
GTEX-XOTO-3026-SM-4B65M 370.4
GTEX-13G51-3026-SM-5IJB8 361.2
GTEX-ZZPT-3026-SM-5GZXH 358.0
GTEX-11EI6-3026-SM-5GZZO 356.6
GTEX-131XW-3126-SM-5LZUC 354.1
GTEX-OXRN-2426-SM-2I5EQ 352.9
GTEX-14A5I-2926-SM-5Q5CQ 352.2
GTEX-11NV4-2126-SM-5N9DS 343.2
GTEX-12WSD-3126-SM-5HL7P 330.6
GTEX-13OW7-3026-SM-5L3GY 329.7
GTEX-N7MT-1126-SM-5SI7V 324.6
GTEX-13S7M-3126-SM-5RQJQ 323.2
GTEX-1128S-2726-SM-5H12C 318.2
GTEX-13PL6-3126-SM-5LUAR 317.4
GTEX-PWO3-0926-SM-2I5EY 316.2
GTEX-RU72-3026-SM-5SI7Y 307.0
GTEX-UTHO-3026-SM-3GAFB 300.9
GTEX-147GR-3026-SM-5S2ML 296.1
GTEX-1445S-3026-SM-5O9BR 289.8
GTEX-12WSA-2926-SM-5EQ4D 283.9
GTEX-12WSH-3026-SM-5CVNI 277.7
GTEX-ZAJG-3126-SM-5HL9J 250.1
GTEX-X4XX-3026-SM-3NMB2 248.1
GTEX-11O72-2926-SM-5BC4V 247.2
GTEX-11OF3-2926-SM-5HL78 220.5
GTEX-13IVO-2926-SM-5L3CZ 136.8
Show all
332.4390.6428.9210.8569.7050100150200250300350400450500550600650
 
332.4390.6428.9210.8569.7050100150200250300350400450500550600650

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 386.5
Samples: 108

Max RPKM: 692.6
Min RPKM: 95.2
Std RPKM: 85.9
Median RPKM: 390.6
GTEX-13N2G-0011-R10a-SM-5MR34 692.6
GTEX-13NYS-0011-R10a-SM-5MR4S 611.0
GTEX-X4EP-0011-R10B-SM-4QASJ 569.7
GTEX-13X6K-0011-R10a-SM-5P9JR 548.6
GTEX-13QJC-0011-R10a-SM-5SI63 540.1
GTEX-132Q8-0011-R10b-SM-5DUWZ 516.3
GTEX-X585-0011-R10A-SM-46MUY 513.6
GTEX-13O3O-0011-R10a-SM-5LUA9 511.2
GTEX-11H98-0011-R10b-SM-5NQ98 506.5
GTEX-13FHO-0011-R10b-SM-5J2MM 501.9
GTEX-13RTJ-0011-R10b-SM-5O9CW 483.6
GTEX-ZAB4-0011-R10a-SM-4SOKH 476.4
GTEX-131XH-0011-R10a-SM-5EGLJ 465.0
GTEX-XLM4-0011-R10A-SM-4AT5P 463.6
GTEX-QVUS-0011-R10A-SM-3GIK3 462.2
GTEX-P44H-0011-R10A-SM-2XCEK 458.9
GTEX-Z93S-0011-R10a-SM-4RGNM 458.8
GTEX-13JUV-0011-R10b-SM-5LZXR 458.3
GTEX-12ZZY-0011-R10b-SM-5HL7W 455.6
GTEX-14ASI-0011-R10b-SM-5S2VZ 451.4
GTEX-12WSE-0011-R10b-SM-5P9JV 441.1
GTEX-13SLX-0011-R10a-SM-5P9HV 440.6
GTEX-147F4-0011-R10b-SM-5S2WC 438.0
GTEX-13OVJ-0011-R10b-SM-5L3HT 434.7
GTEX-14BIN-0011-R10a-SM-5S2UA 434.3
GTEX-145MG-0011-R10a-SM-5PNWG 433.9
GTEX-T5JC-0011-R10A-SM-32PM2 432.0
GTEX-T6MN-0011-R10A-SM-32QP7 427.8
GTEX-YFC4-0011-R10a-SM-4SOK5 427.1
GTEX-13OW7-0011-R10a-SM-5L3H3 424.6
GTEX-12WSC-0011-R10a-SM-5GU57 424.3
GTEX-YJ89-0011-R10a-SM-4SOK9 421.2
GTEX-13FLW-0011-R10b-SM-5LZZF 420.4
GTEX-14BIL-0011-R10a-SM-5SI75 420.2
GTEX-12WSF-0011-R10a-SM-5LZVH 417.8
GTEX-13OW8-0011-R10a-SM-5L3H6 413.9
GTEX-13CZV-0011-R10b-SM-5LZYD 412.4
GTEX-S7SE-0011-R10A-SM-2XCDF 411.0
GTEX-1313W-0011-R10b-SM-5DUXA 408.1
GTEX-13QIC-0011-R10a-SM-5O9C7 407.1
GTEX-NPJ7-0011-R10A-SM-2I3E5 404.7
GTEX-WVLH-0011-R10A-SM-3MJFM 404.5
GTEX-13FXS-0011-R10a-SM-5J2MA 403.4
GTEX-ZVZQ-0011-R10b-SM-51MRT 402.2
GTEX-WZTO-0011-R10B-SM-4E3KB 400.4
GTEX-12WSD-0011-R10b-SM-5GU79 400.3
GTEX-13OVL-0011-R10a-SM-5L3GS 399.4
GTEX-13OW6-0011-R10a-SM-5L3HE 398.5
GTEX-N7MS-0011-R10A-SM-2HMJK 395.9
GTEX-N7MT-0011-R10A-SM-2I3E1 395.0
GTEX-13O3Q-0011-R10b-SM-5KM39 394.8
GTEX-13X6J-0011-R10b-SM-5PNWA 394.7
GTEX-13N1W-0011-R10b-SM-5MR4H 391.8
GTEX-QMR6-0011-R10A-SM-32PKO 391.2
GTEX-WWYW-0011-R10A-SM-3NB35 390.1
GTEX-TSE9-0011-R10A-SM-3DB7O 388.7
GTEX-145LS-0011-R10a-SM-5PNUQ 387.3
GTEX-ZDXO-0011-R10a-SM-4WWD8 386.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 385.4
GTEX-145MH-0011-R10b-SM-5PNUK 385.0
GTEX-Y8DK-0011-R10A-SM-4SOK1 381.9
GTEX-12ZZX-0011-R10b-SM-5DUWK 380.6
GTEX-147GR-0011-R10b-SM-5S2UM 380.0
GTEX-13FLV-0011-R10b-SM-5LZZ2 378.1
GTEX-XMD1-0011-R10A-SM-4AT4A 375.9
GTEX-NPJ8-0011-R10A-SM-2YUMO 373.9
GTEX-QDT8-0011-R10A-SM-32PKG 371.4
GTEX-11ZUS-0011-R10b-SM-5BC79 368.3
GTEX-ZVT3-0011-R10b-SM-57WB6 368.1
GTEX-RVPU-0011-R10A-SM-2XCAH 366.9
GTEX-131YS-0011-R10b-SM-5EQ5N 366.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC 365.2
GTEX-WL46-0011-R10A-SM-3MJFQ 364.0
GTEX-13X6I-0011-R10a-SM-5PNWI 362.9
GTEX-13S7M-0011-R10b-SM-5PNZB 360.9
GTEX-13NYB-0011-R10a-SM-5KM43 355.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 355.0
GTEX-145LU-0011-R10a-SM-5PNWJ 340.1
GTEX-12WSM-0011-R10a-SM-5DUWV 339.5
GTEX-ZF28-0011-R10a-SM-4WWEH 335.2
GTEX-12WSA-0011-R10b-SM-5P9ET 332.7
GTEX-11WQK-0011-R10a-SM-5BC6R 331.6
GTEX-11GSP-0011-R10a-SM-5NQ7J 329.5
GTEX-1445S-0011-R10a-SM-5PNWB 326.3
GTEX-ZUA1-0011-R10a-SM-51MT6 324.4
GTEX-NL3H-0011-R10A-SM-2I3E9 324.2
GTEX-NL4W-0011-R10A-SM-2I3DY 323.9
GTEX-12WSH-0011-R10a-SM-5LZUS 319.0
GTEX-OXRN-0011-R10A-SM-2I5GC 315.4
GTEX-X261-0011-R10B-SM-4E3JT 315.0
GTEX-13G51-0011-R10b-SM-5LZYF 314.4
GTEX-139TS-0011-R10a-SM-5K7TU 311.5
GTEX-14753-0011-R10b-SM-5S2WE 310.5
GTEX-13SLW-0011-R10a-SM-5S2UI 306.6
GTEX-12126-0011-R10b-SM-5BC6T 305.9
GTEX-12ZZW-0011-R10b-SM-5HL9X 297.9
GTEX-13JVG-0011-R10b-SM-5KM2P 291.7
GTEX-13FTZ-0011-R10b-SM-5KLZS 283.1
GTEX-ZE7O-0011-R10a-SM-57WAZ 281.1
GTEX-11WQC-0011-R10a-SM-57WCT 274.5
GTEX-1477Z-0011-R10b-SM-5S2RF 270.8
GTEX-X4XX-0011-R10B-SM-46MWO 256.6
GTEX-ZXG5-0011-R10a-SM-57WDD 248.2
GTEX-13NZA-0011-R10b-SM-5KM54 239.1
GTEX-131XW-0011-R10a-SM-5DUVA 231.1
GTEX-ZV68-0011-R10a-SM-51MT7 210.8
GTEX-OXRO-0011-R10A-SM-2I5EH 150.0
GTEX-13IVO-0011-R10a-SM-5LZY3 95.2
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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